Pre_GI: BLASTP Hits

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Query: NC_010572:1081236:1084139 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 1084139, End: 1084366, Length: 228

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016604:297687:307972307972308202231Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein1e-2098.6
NC_017904:3415700:342601034260103426240231Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein7e-2095.9
NC_016948:3381848:339215533921553392385231Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein7e-2095.9
NC_016947:3309898:332021433202143320444231Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein7e-2095.9
NC_008278:2732890:276060527606052760820216Frankia alni ACN14a, complete genomeMbtH protein8e-2095.5
NC_010397:4150596:416098441609844161214231Mycobacterium abscessus chromosome Chromosome, complete sequenceMbtH-like protein2e-1994.7
NC_010612:3969244:397938939793893979619231Mycobacterium marinum M, complete genomeconserved hypothetical MbtH-like protein4e-1993.6
NC_007777:2841000:285902628590262859256231Frankia sp. CcI3, complete genomeMbtH-like protein8e-1992.4
NC_008596:421882:447638447638447868231Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein9e-1992
NC_010612:90890:995279952799763237Mycobacterium marinum M, complete genomeconserved hypothetical MbtH-like protein3e-1890.5
NC_014168:709036:724028724028724264237Segniliparus rotundus DSM 44985 chromosome, complete genomeMbtH domain-containing protein1e-1788.6
NC_009380:3043140:307273330727333072942210Salinispora tropica CNB-440 chromosome, complete genomeMbtH domain-containing protein2e-1581.3
NC_014210:2107738:212134721213472121568222Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,MbtH domain protein2e-1580.9
NC_009921:3551036:359898835989883599239252Frankia sp. EAN1pec, complete genomeMbtH domain protein2e-1374.7
NC_012880:3529017:356126835612683561474207Dickeya dadantii Ech703, complete genomeMbtH domain protein1e-1271.6
NC_015953:5612446:563696956369695637187219Streptomyces sp. SirexAA-E chromosome, complete genomeMbtH domain-containing protein1e-1271.6
NC_013960:1808523:181616618161661816369204Nitrosococcus halophilus Nc4 chromosome, complete genomeMbtH domain protein2e-1271.2
NC_010676:61098:816068160681845240Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMbtH domain protein2e-1270.9
NC_015276:1037862:104697110469711047177207Marinomonas mediterranea MMB-1 chromosome, complete genomeMbtH domain protein2e-1270.9
NC_012997:4491871:449827844982784498535258Teredinibacter turnerae T7901, complete genomeMbtH-like protein4e-1167
NC_016112:1735044:174917117491711749389219Methylomicrobium alcaliphilum chromosome, complete genomeprotein mbtH4e-1166.6
NC_013161:1878700:188597318859731886173201Cyanothece sp. PCC 8802, complete genomeMbtH domain protein1e-1065.1
NC_015859:3177199:320577932057793205982204Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein5e-1063.2
NC_019673:4974422:498073849807384980956219Saccharothrix espanaensis DSM 44229 complete genomeMbtH-like protein4e-1063.2
NC_007164:2068678:208467120846712084898228Corynebacterium jeikeium K411, complete genomehypothetical protein9e-1062.4
NC_011726:1911500:191614619161461916346201Cyanothece sp. PCC 8801, complete genomeMbtH domain protein1e-0962
NC_015968:1165829:117947711794771179689213Enterobacter asburiae LF7a chromosome, complete genomeMbtH domain-containing protein1e-0962
NC_014623:5942918:594611859461185946342225Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeMbtH-like domain-containing protein1e-0961.6
NC_012997:2405500:242489124248912425079189Teredinibacter turnerae T7901, complete genomeMbtH-like protein2e-0961.2
NC_003155:3913789:393008839300883930255168Streptomyces avermitilis MA-4680, complete genomeMbtH-like protein3e-0960.8
NC_016109:6507076:652627965262796526470192Kitasatospora setae KM-6054, complete genomehypothetical protein4e-0960.1