Pre_GI: BLASTP Hits

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Query: NC_010501:734363:753456 Pseudomonas putida W619, complete genome

Start: 753456, End: 755477, Length: 2022

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4999946:5008867500886750108882022Pseudomonas fluorescens F113 chromosome, complete genomedna mismatch repair protein01085
NC_008554:4699577:4706059470605947080471989Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein9e-92338
NC_014365:2843126:2860374286037428623621989Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-binding region ATPase domain protein5e-91335
NC_008782:2326439:2331946233194623339011956Acidovorax sp. JS42, complete genomeDNA mismatch repair enzyme (predicted ATPase)-like protein1e-89331
NC_008786:1298817:1310843131084313128582016Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein2e-85317
NC_014664:1614568:1621363162136316233571995Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein2e-83310
NC_009972:606393:6152466152466170751830Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein1e-41171
NC_014216:2538500:2548174254817425498381665Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeATP-binding region ATPase domain protein1e-36154
NC_006512:2789098:2803552280355228057892238Idiomarina loihiensis L2TR, complete genomePredicted signaling protein with an ATPase domain2e-0654.7
NC_012560:3667177:3675814367581436779852172Azotobacter vinelandii DJ, complete genomeATP binding/ATPase (HATPase_c) domain-containing protein3e-0654.3
NC_021150:3667176:3675813367581336779842172Azotobacter vinelandii CA6, complete genomeATP binding/ATPase (HATPase c) domain-containing protein3e-0654.3