Pre_GI: BLASTP Hits

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Query: NC_010501:4787963:4787963 Pseudomonas putida W619, complete genome

Start: 4787963, End: 4788298, Length: 336

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1151143:117603611760361176374339Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Sec protein secretion system, subunit yajC2e-42171
NC_016830:1182765:120565312056531205988336Pseudomonas fluorescens F113 chromosome, complete genomeprotein YajC4e-42169
NC_007492:5214709:521915552191555219490336Pseudomonas fluorescens PfO-1, complete genomeYajC8e-42168
NC_012660:5571500:557443855744385574776339Pseudomonas fluorescens SBW25 chromosome, complete genomepreprotein translocase subunit YajC6e-41165
NC_004129:5723787:572571857257185726056339Pseudomonas fluorescens Pf-5, complete genomepreprotein translocase subunit YajC8e-41165
NC_020829:4246847:424877442487744249115342Pseudomonas denitrificans ATCC 13867, complete genomepreprotein translocase subunit YajC3e-33140
NC_008789:1837493:185420518542051854549345Halorhodospira halophila SL1, complete genomepreprotein translocase, YajC subunit1e-21101
NC_008601:1151653:115803511580351158391357Francisella tularensis subsp. novicida U112, complete genomepreprotein translocase family protein4e-1993.2
NC_018012:3401854:341959834195983419933336Thiocystis violascens DSM 198 chromosome, complete genomeprotein translocase subunit yajC8e-1992.4
NC_020299:127480:129407129407129760354Candidatus Kinetoplastibacterium oncopeltii TCC290E, completepreprotein translocase subunit YajC1e-1892
NC_007508:3034718:305116830511683051521354Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomepreprotein translocase subunit YajC4e-1890.1
NC_008610:1068429:107417410741741074515342Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),preprotein translocase, YajC subunit6e-1889.4
NC_017271:2789667:280745028074502807803354Xanthomonas campestris pv. raphani 756C chromosome, completepreprotein translocase subunit YajC1e-1788.6
NC_018697:1343756:134657613465761346935360Cycloclasticus sp. P1 chromosome, complete genomePreprotein translocase subunit YajC2e-1787.4
NC_009465:938378:941152941152941493342Candidatus Vesicomyosocius okutanii HA, complete genomepreprotein translocase YajC subunit2e-1684.7
NC_015581:1133775:113681711368171137251435Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomepreprotein translocase subunit YajC1e-1478.6
NC_008789:1837493:185456718545671854938372Halorhodospira halophila SL1, complete genomepreprotein translocase, YajC subunit4e-1373.6
NC_017192:497950:516031516031516306276Arcobacter sp. L, complete genomepreprotein translocase subunit2e-1270.9
NC_015949:2101302:212248221224822122847366Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomepreprotein translocase subunit YajC4e-1167
NC_014721:373607:376149376149376514366Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepreprotein translocase, yajc subunit4e-1167
NC_014720:2420455:245389424538942454259366Caldicellulosiruptor kronotskyensis 2002 chromosome, completepreprotein translocase, yajc subunit4e-1167
NC_012034:438000:443657443657444022366Anaerocellum thermophilum DSM 6725, complete genomepreprotein translocase, YajC subunit4e-1167
NC_014392:412916:418889418889419254366Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomepreprotein translocase, YajC subunit3e-1167
NC_014355:3248386:325425432542543254574321Candidatus Nitrospira defluvii, complete genomepreprotein translocase subunit YajC8e-1165.9
NC_014657:291567:293832293832294200369Caldicellulosiruptor owensensis OL chromosome, complete genomepreprotein translocase, yajc subunit1e-1065.5
NC_010830:475248:488355488355488681327Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1064.7
NC_007614:2764848:276676227667622766947186Nitrosospira multiformis ATCC 25196 chromosome 1, completepreprotein translocase YajC subunit8e-0958.9
NC_010571:4483500:450793945079394508283345Opitutus terrae PB90-1, complete genomepreprotein translocase, YajC subunit1e-0858.5
NC_008686:1383891:138557213855721385904333Paracoccus denitrificans PD1222 chromosome 1, complete sequencepreprotein translocase, YajC subunit1e-0858.5
NC_010382:3783879:380793838079383808201264Lysinibacillus sphaericus C3-41, complete genomehypothetical protein2e-0858.2
NC_011059:2272747:229226322922632292616354Prosthecochloris aestuarii DSM 271, complete genomepreprotein translocase, YajC subunit4e-0857
NC_014328:3682000:369182336918233692149327Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein5e-0856.6
NC_006156:685344:692416692416692730315Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein9e-0855.5
NC_016940:3696570:371788237178823718226345Saprospira grandis str. Lewin chromosome, complete genomepreprotein translocase subunit YajC1e-0755.1
NC_011565:190406:203423203423203761339Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,preprotein translocase YajC subunit2e-0754.3
NC_017515:1653306:165537116553711655637267Neisseria meningitidis M04-240196 chromosome, complete genomepreprotein translocase subunit YajC2e-0754.3
NC_015391:695350:715051715051715356306Carnobacterium sp. 17-4 chromosome, complete genomepreprotein translocase subunit YajC8e-0752.4
NC_011725:4373721:439584743958474396107261Bacillus cereus B4264 chromosome, complete genomepreprotein translocase subunit YajC1e-0652
NC_015500:987641:101288910128891013293405Treponema brennaborense DSM 12168 chromosome, complete genomepreprotein translocase, YajC subunit2e-0651.6
NC_020409:512861:530612530612530968357Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-0651.2
NC_007798:260324:263902263902264204303Neorickettsia sennetsu str. Miyayama, complete genomepreprotein translocase, YajC subunit9e-0648.9