Pre_GI: BLASTP Hits

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Query: NC_010501:3987615:3999352 Pseudomonas putida W619, complete genome

Start: 3999352, End: 4000065, Length: 714

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:1912348:192200019220001922695696Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible resolvase4e-31134
NC_007492:3954345:398111639811163981862747Pseudomonas fluorescens PfO-1, complete genomeResolvase-like3e-28125
NC_002947:1268089:127665712766571277367711Pseudomonas putida KT2440, complete genomesite-specific recombinase, resolvase family1e-24113
NC_011769:3434744:344837734483773449063687Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeResolvase domain protein2e-1376.3
NC_007298:2689731:269958526995852700274690Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal3e-1272
NC_013173:953633:976055976055976738684Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein1e-1170.5
NC_009485:5171658:518306951830695183713645Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-invertase6e-1167.8
NC_004463:5540924:555310755531075553823717Bradyrhizobium japonicum USDA 110, complete genomeputative resolvase2e-1066.2
NC_011894:7563668:758709175870917587786696Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein4e-1065.1
NC_010505:4396800:441274144127414413436696Methylobacterium radiotolerans JCM 2831, complete genomeResolvase domain protein1e-0963.5
NC_009937:1733196:174168017416801742357678Azorhizobium caulinodans ORS 571, complete genomeresolvase family protein2e-0962.8
NC_014923:4017575:403353240335324034305774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeResolvase domain3e-0962.4
NC_010511:5424004:543344754334475434157711Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein8e-0960.8
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein1e-0860.5
NC_012988:4633930:464917846491784649987810Methylobacterium extorquens DM4, complete genomeresolvase, N-terminal1e-0860.5
NC_010172:4185904:420216842021684202977810Methylobacterium extorquens PA1, complete genomeResolvase domain1e-0860.5
NC_008686:1960034:1972763197276319744991737Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase6e-0857.8
NC_008686:95326:9763697636994291794Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase8e-0857.4
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein1e-0756.6
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein1e-0756.6
NC_009720:900884:9144479144479164351989Xanthobacter autotrophicus Py2, complete genomerecombinase3e-0755.5
NC_009668:445134:4623194623194639741656Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencerecombinase4e-0755.1
NC_011000:3362382:337420133742013374914714Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage resolvase/recombinase for integration and excision5e-0755.1
NC_011369:4395773:440916744091674409817651Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeResolvase domain7e-0754.3
NC_010084:2674972:268798226879822688695714Burkholderia multivorans ATCC 17616 chromosome 1, completeresolvase domain-containing protein1e-0653.5
NC_010804:831000:836078836078836791714Burkholderia multivorans ATCC 17616 chromosome 1, completeserine recombinase1e-0653.5
NC_011894:7421867:742715374271537428040888Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein2e-0653.1
NC_008687:302450:3066933066933083511659Paracoccus denitrificans PD1222 chromosome 2, complete sequenceRecombinase1e-0653.1
NC_007778:1053462:106665810666581067362705Rhodopseudomonas palustris HaA2, complete genomeResolvase-like2e-0652.4
NC_016812:463000:480936480936481592657Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR3e-0652.4
NC_011146:1998981:200636420063642007050687Geobacter bemidjiensis Bem, complete genomeResolvase domain3e-0652.4
NC_016812:4246542:425467142546714255303633Sinorhizobium fredii HH103, complete genomeDNA-invertase4e-0652
NC_009077:3851203:3859860385986038610021143Mycobacterium sp. JLS, complete genomeResolvase, N-terminal domain5e-0651.6
NC_014355:139324:153211153211153825615Candidatus Nitrospira defluvii, complete genomeDNA-invertase6e-0651.2
NC_009720:5046861:5053666505366650554201755Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein9e-0650.4