Pre_GI: BLASTP Hits

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Query: NC_010501:2511887:2541063 Pseudomonas putida W619, complete genome

Start: 2541063, End: 2545274, Length: 4212

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020210:1275031:1339187133918713428013615Geobacillus sp. GHH01, complete genomeDNA/RNA helicase3e-53211
NC_014915:1376035:1376035137603513798773843Geobacillus sp. Y412MC52 chromosome, complete genomeAAA ATPase6e-35150
NC_013411:2236166:2236166223616622399333768Geobacillus sp. Y412MC61, complete genomeAAA ATPase8e-35150
NC_006510:1446490:1446490144649014502573768Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-34147
NC_016593:1527456:1527456152745615311933738Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeAAA ATPase2e-33145
NC_014253:142026:1449141449141487473834Methanohalobium evestigatum Z-7303 chromosome, complete genomehypothetical protein5e-33144
NC_007796:1731500:1731871173187117356983828Methanospirillum hungatei JF-1, complete genomehypothetical protein2e-32142
NC_015474:538544:5557295557295596193891Pyrococcus sp. NA2 chromosome, complete genomeDNA helicase related protein1e-21106
NC_015954:1437544:1437544143754414403212778Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas45e-1687.8
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase1e-1483.2
NC_013849:397947:4060154060154078111797Ferroglobus placidus DSM 10642 chromosome, complete genometype III restriction protein res subunit1e-1276.6
NC_015164:3099097:3106738310673831109914254Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein2e-1275.9
NC_009953:3509229:3512609351260935154342826Salinispora arenicola CNS-205 chromosome, complete genomeputative helicase2e-1172.8
NC_015757:70790:7705777057818144758Sulfobacillus acidophilus TPY chromosome, complete genome5e-1171.2
NC_016884:70955:7729777297820394743Sulfobacillus acidophilus DSM 10332 chromosome, complete genomesuperfamily I DNA/RNA helicase6e-1171.2
NC_008595:1349579:1351464135146413548773414Mycobacterium avium 104, complete genomeATPase5e-1068.2
NC_015277:3351504:3356971335697133588631893Sphingobacterium sp. 21 chromosome, complete genomeAAA ATPase2e-0966.2
NC_015311:403281:4032814032814066613381Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-0965.9
NC_013947:3080290:3088272308827230918623591Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase C14 caspase catalytic subunit p203e-0965.1
NC_018581:2768743:2795540279554027983472808Gordonia sp. KTR9 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits6e-0757.8
NC_013929:7278414:7278414727841472823553942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-0655.5