Pre_GI: BLASTP Hits

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Query: NC_010498:4967724:4974394 Escherichia coli SMS-3-5, complete genome

Start: 4974394, End: 4975176, Length: 783

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020453:3103549:310536931053693106160792Agromonas oligotrophica S58 DNA, complete genomehydroxypyruvate isomerase1e-89329
NC_015733:3736104:378104337810433781798756Pseudomonas putida S16 chromosome, complete genomehydroxypyruvate isomerase5e-86317
NC_011894:3161289:318899731889973189788792Methylobacterium nodulans ORS 2060, complete genomehydroxypyruvate isomerase2e-84312
NC_006513:2708213:272860627286062729448843Azoarcus sp. EbN1, complete genomeputative hydroxypyruvate isomerase protein3e-79295
NC_008570:1143578:114280811428081143581774Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeAP endonuclease, family 21e-70266
NC_009664:63230:790917909179912822Kineococcus radiotolerans SRS30216, complete genomeHydroxypyruvate isomerase2e-69262
NC_003197:3005842:305803230580323058808777Salmonella typhimurium LT2, complete genomeputative endonuclease3e-67255
NC_016856:3026426:307826930782693079045777Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-67255
NC_016860:3029272:308146230814623082238777Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-67255
NC_016863:2974333:302652130265213027297777Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-67255
NC_017046:3027161:307934830793483080124777Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydroxypyruvate isomerase3e-67255
NC_016810:3028421:308060830806083081369762Salmonella enterica subsp. enterica serovar Typhimurium strputative hydroxypyruvate isomerase5e-66251
NC_016857:3028421:308060830806083081369762Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74YgbM protein5e-66251
NC_009801:3013838:304011830401183040894777Escherichia coli E24377A, complete genomeAP endonuclease, family 24e-66251
NC_008782:1863853:188682918868291887656828Acidovorax sp. JS42, complete genomeHydroxypyruvate isomerase7e-66250
NC_016831:2867766:292005529200552920831777Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydroxypyruvate isomerase5e-65247
NC_013850:2846069:284669428466942847476783Klebsiella variicola At-22 chromosome, complete genomeHydroxypyruvate isomerase5e-64244
NC_011283:2836000:283983128398312840613783Klebsiella pneumoniae 342 chromosome, complete genomeAP endonuclease, family 21e-58226
NC_011283:2836000:285675928567592857541783Klebsiella pneumoniae 342 chromosome, complete genomeAP endonuclease, family 21e-58226
NC_016513:317197:324142324142324918777Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completehydroxypyruvate isomerase4e-58224
NC_013416:16493:218242182422600777Aggregatibacter actinomycetemcomitans D11S-1, complete genomehydroxypyruvate isomerase3e-56218
NC_009439:3535152:353437035343703535161792Pseudomonas mendocina ymp, complete genomehydroxypyruvate isomerase9e-55213
NC_015381:1623587:167294016729401673710771Burkholderia gladioli BSR3 chromosome 1, complete sequencehydroxypyruvate isomerase2e-51202
NC_012560:1965251:196838319683831969171789Azotobacter vinelandii DJ, complete genomehydroxypyruvate isomerase protein9e-50197
NC_021150:1965264:196839619683961969184789Azotobacter vinelandii CA6, complete genomehydroxypyruvate isomerase protein9e-50197
NC_010676:2658495:267663426766342677422789Burkholderia phytofirmans PsJN chromosome 2, complete sequenceHydroxypyruvate isomerase3e-46185
NC_012032:448161:464835464835465605771Chloroflexus sp. Y-400-fl, complete genomeXylose isomerase domain protein TIM barrel3e-31135
NC_010175:448020:464693464693465463771Chloroflexus aurantiacus J-10-fl, complete genomeXylose isomerase domain protein TIM barrel3e-31135
NC_013729:4978401:498338749833874984196810Kribbella flavida DSM 17836, complete genomeHydroxypyruvate isomerase3e-29129
NC_014963:5034904:505526250552625056122861Terriglobus saanensis SP1PR4 chromosome, complete genomexylose isomerase domain-containing protein4e-26118
NC_014041:4517999:452638645263864527327942Zunongwangia profunda SM-A87 chromosome, complete genomeprobable glyoxylate-induced protein9e-26117
NC_018531:3983925:399947439994744000277804Arthrobacter sp. Rue61a chromosome, complete genomehydroxypyruvate isomerase2e-25116
NC_018531:1900619:193793319379331938709777Arthrobacter sp. Rue61a chromosome, complete genomexylose isomerase domain-containing protein2e-23109
NC_014364:2751662:276072227607222761519798Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel7e-23107
NC_013757:2858327:287227328722732873049777Geodermatophilus obscurus DSM 43160, complete genomeXylose isomerase domain protein TIM barrel2e-21102
NC_015737:1724590:172892417289241729718795Clostridium sp. SY8519, complete genomehydroxypyruvate isomerase5e-21101
NC_013850:3340882:335603633560363356815780Klebsiella variicola At-22 chromosome, complete genomeXylose isomerase domain protein TIM barrel4e-1995.1
NC_009832:2596344:261601126160112616790780Serratia proteamaculans 568, complete genomeXylose isomerase domain protein TIM barrel6e-1891.3
NC_015914:4489601:450363545036354504549915Cyclobacterium marinum DSM 745 chromosome, complete genomexylose isomerase domain-containing protein2e-1789.4
NC_015379:2751342:275501627550162755807792Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative isomerase6e-1788.2
NC_014472:3785319:380506638050663805935870Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein7e-1374.3
NC_011071:1178423:119365311936531194549897Stenotrophomonas maltophilia R551-3, complete genomeXylose isomerase domain protein TIM barrel2e-1066.2
NC_015947:1142206:115707511570751157971897Burkholderia sp. JV3 chromosome, complete genomexylose isomerase domain-containing protein3e-1065.5
NC_015594:489367:501140501140502024885Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completexylose isomerase domain-containing protein8e-1064.3
NC_014364:773500:773883773883774707825Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel5e-0961.6
NC_014364:3707311:372507537250753725887813Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel2e-0859.7
NC_016590:1380092:139937013993701400245876Burkholderia sp. YI23 chromosome 3, complete sequencexylose isomerase domain-containing protein5e-0755.1
NC_013037:3994083:400869040086904009601912Dyadobacter fermentans DSM 18053, complete genomeXylose isomerase domain protein TIM barrel1e-0653.9