Pre_GI: BLASTP Hits

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Query: NC_010488:48868:70340 Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence

Start: 70340, End: 71080, Length: 741

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:4024000:403354640335464034286741Salmonella enterica subsp. enterica serovar Typhimurium strintegrase2e-140498
NC_007941:11319:444734447345213741Escherichia coli UTI89 plasmid pUTI89, complete sequencesite-specific recombinase1e-138491
NC_009649:94871:109220109220109960741Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,integrase6e-132469
NC_015963:117178:140533140533141273741Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceintegrase family protein1e-126452
NC_014305:66500:685506855069341792Erwinia billingiae Eb661 plasmid pEB170, complete sequenceSite-specific recombinase1e-109395
NC_014842:19411:416954169542561867Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceintegrase family protein5e-55214
NC_009837:92000:9951599515100318804Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceresolvase1e-51202
NC_007941:11319:510975109751906810Escherichia coli UTI89 plasmid pUTI89, complete sequenceresolvase2e-49195
NC_006625:111000:112051112051112830780Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencephage integrase family protein5e-49194
NC_013285:1:123912392093855Cronobacter turicensis plasmid pCTU3, complete sequenceResolvase4e-49194
NC_009790:42112:567925679257505714Escherichia coli E24377A plasmid pETEC_74, complete sequenceresolvase2e-47189
NC_015566:345084:351720351720352316597Serratia sp. AS12 chromosome, complete genomeintegrase family protein3e-29129
NC_015567:346500:351885351885352481597Serratia sp. AS9 chromosome, complete genomeintegrase family protein3e-29129
NC_018868:619113:657835657835658572738Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephage integrase family protein1e-21103
NC_008740:1414926:141818414181841418924741Marinobacter aquaeolei VT8, complete genomephage integrase family protein3e-1892
NC_017506:1785872:178923917892391789835597Marinobacter adhaerens HP15 chromosome, complete genomeresolvase1e-1790.1
NC_009464:180335:196349196349197185837Uncultured methanogenic archaeon RC-I, complete genomeintegrase9e-1167.4
NC_015167:1666000:168520416852041686097894Cellulophaga lytica DSM 7489 chromosome, complete genomeintegrase family protein1e-1066.6
NC_014098:1670327:168634716863471687228882Bacillus tusciae DSM 2912 chromosome, complete genomeintegrase family protein6e-1064.7
NC_007384:4095016:411272841127284113705978Shigella sonnei Ss046, complete genome6e-0961.2
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD7e-0960.8
NC_014933:220146:2444792444792456091131Bacteroides helcogenes P 36-108 chromosome, complete genomeintegrase family protein2e-0859.7
NC_003228:2010643:203162020316202032504885Bacteroides fragilis NCTC 9343, complete genomeputative tyrosine recombinase2e-0859.7
NC_015703:5865921:5868888586888858705041617Runella slithyformis DSM 19594 chromosome, complete genomeintegron integrase3e-0858.9
NC_009454:1246393:124639312463931247280888Pelotomaculum thermopropionicum SI, complete genomesite-specific recombinase XerD4e-0858.5
NC_015914:4248000:426095742609574261796840Cyclobacterium marinum DSM 745 chromosome, complete genome6e-0858.2
NC_015914:4248000:425594242559424256781840Cyclobacterium marinum DSM 745 chromosome, complete genome6e-0858.2
NC_017305:1037133:104184010418401042772933Corynebacterium pseudotuberculosis PAT10 chromosome, completetyrosine recombinase XerD6e-0857.8
NC_017303:1039562:104426910442691045201933Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerD6e-0857.8
NC_017301:1037519:104406810440681045000933Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerD6e-0857.8
NC_017031:1039548:104425510442551045187933Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerD6e-0857.8
NC_016781:1039716:104442310444231045355933Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerD6e-0857.8
NC_014329:1041556:104443210444321045364933Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase6e-0857.8
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD9e-0857.4
NC_013521:2193203:221540622154062216359954Sanguibacter keddieii DSM 10542, complete genometyrosine recombinase XerD9e-0857.4
NC_018645:2390032:239111423911142391989876Desulfobacula toluolica Tol2, complete genomeintegrase9e-0857.4
NC_018645:2390032:240389624038962404771876Desulfobacula toluolica Tol2, complete genomeintegrase9e-0857.4
NC_010814:2394250:239990423999042400881978Geobacter lovleyi SZ, complete genomeputative transcriptional regulator, TetR family8e-0857.4
NC_013209:1969734:198503619850361985983948Acetobacter pasteurianus IFO 3283-01, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017100:1972389:198769119876911988638948Acetobacter pasteurianus IFO 3283-03, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017108:1969716:198501819850181985965948Acetobacter pasteurianus IFO 3283-12, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017111:1969704:198500619850061985953948Acetobacter pasteurianus IFO 3283-32, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017121:1969716:198501819850181985965948Acetobacter pasteurianus IFO 3283-07, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017125:1972384:198768619876861988633948Acetobacter pasteurianus IFO 3283-22, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017146:1972396:198769819876981988645948Acetobacter pasteurianus IFO 3283-26, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_017150:1877480:189278218927821893729948Acetobacter pasteurianus IFO 3283-01-42C, complete genomephage DNA recombinase RipX/XerC1e-0757
NC_019960:1658657:168363516836351684561927Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD1e-0757
NC_017025:311832:3299693299693310061038Flavobacterium indicum GPTSA100-9, complete genomeIntegrase/recombinase2e-0756.2
NC_020450:875757:884017884017884991975Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeintegrase/recombinase2e-0756.2
NC_009615:3993187:399412339941233995028906Parabacteroides distasonis ATCC 8503 chromosome, complete genometyrosine type site-specific recombinase2e-0756.2
NC_013958:29548:328063280633738933Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase family protein2e-0756.2
NC_013926:71186:902119021191023813Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein3e-0755.8
NC_007645:1785000:179918717991871800041855Hahella chejuensis KCTC 2396, complete genometyrosine recombinase XerD5e-0755.1
NC_014228:2883500:2887800288780028888011002Xenorhabdus nematophila ATCC 19061, complete genomeInt (fragment)6e-0754.7
NC_011586:268927:3115973115973126311035Acinetobacter baumannii AB0057 chromosome, complete genomeIntI1 integrase7e-0754.3
NC_016641:5671186:5692012569201256931511140Paenibacillus terrae HPL-003 chromosome, complete genomeintegrase/recombinase y4qK7e-0754.3
NC_012969:2476318:251726225172622518158897Methylovorus glucosetrophus SIP3-4 chromosome, complete genometyrosine recombinase XerD9e-0753.9
NC_015186:2197236:225468822546882255593906Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element9e-0753.9
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD1e-0653.5
NC_014924:2108116:2131128213112821321351008Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeintegron integrase2e-0652.8
NC_018645:3029785:304322430432243044132909Desulfobacula toluolica Tol2, complete genometyrosine recombinase subunit D XerD2e-0652.8
NC_007712:1262593:127829912782991279018720Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0652.8
NC_013009:122000:127127127127128032906Neorickettsia risticii str. Illinois, complete genometyrosine recombinase XerD3e-0652.4
NC_007498:1611986:1615835161583516168361002Pelobacter carbinolicus DSM 2380, complete genomesite-specific recombinase XerD3e-0652.4
NC_014733:2363838:238616023861602387056897Methylovorus sp. MP688 chromosome, complete genometyrosine recombinase xerd3e-0652.4
NC_007798:112840:115865115865116782918Neorickettsia sennetsu str. Miyayama, complete genometyrosine recombinase XerD5e-0651.6
NC_016629:3308329:333954633395463340514969Desulfovibrio africanus str. Walvis Bay chromosome, completeTyrosine recombinase xerC5e-0651.6
NC_011751:4992500:4993107499310749941201014Escherichia coli UMN026 chromosome, complete genomeIntegrase/recombinase (E2 protein)6e-0651.2
NC_016901:2594942:262298326229832623873891Shewanella baltica OS678 chromosome, complete genomeintegrase family protein6e-0651.2
NC_009997:2635025:266306626630662663956891Shewanella baltica OS195, complete genomeintegrase family protein6e-0651.2
NC_012779:3176820:322735132273513228250900Edwardsiella ictaluri 93-146, complete genometyrosine recombinase XerD, putative6e-0651.2