Pre_GI: BLASTP Hits

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Query: NC_010475:649177:671017 Synechococcus sp. PCC 7002, complete genome

Start: 671017, End: 671745, Length: 729

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008312:3793760:383173038317303832440711Trichodesmium erythraeum IMS101, complete genomePhycobilisome linker polypeptide1e-60233
NC_008319:2172928:217679921767992177563765Synechococcus sp. CC9311, complete genomephycobilisome rod-core linker polypeptide cpcG12e-44179
NC_007516:2090901:209460820946082095396789Synechococcus sp. CC9605, complete genomephycobilisome rod-core linker polypeptide cpcG (L-RC 28.5)3e-44178
NC_007516:413159:439716439716440474759Synechococcus sp. CC9605, complete genomepossible phycobilisome rod-core linker polypeptide (L-RC 28.5)5e-39161
NC_008319:478499:501372501372502130759Synechococcus sp. CC9311, complete genomepossible phycobilisome rod-core linker polypeptide (L-RC 28.5)9e-38157
NC_005070:1898612:190099919009991901757759Synechococcus sp. WH 8102, complete genomepossible phycobilisome rod-core linker polypeptide (L-RC 28.5)4e-36151
NC_009482:1761529:176505117650511765824774Synechococcus sp. RCC307 chromosome, complete genomephycobilisome rod-core linker polypeptide CpcG (L-RC 28.5)2e-35149
NC_007516:2383097:239207923920792392825747Synechococcus sp. CC9605, complete genomepossible phycobilisome rod-core linker polypeptide (L-RC 28.5)5e-32137
NC_007513:942500:978497978497979261765Synechococcus sp. CC9902, complete genomepossible phycobilisome rod-core linker polypeptide4e-29128
NC_008319:1119076:112911011291101129841732Synechococcus sp. CC9311, complete genomepossible phycobilisome rod-core linker polypeptide (L-RC 28.5)8e-29127
NC_008319:478499:502383502383503213831Synechococcus sp. CC9311, complete genomePossible phycobilisome linker polypeptide2e-1789.7
NC_010546:2711929:272073227207322721553822Cyanothece sp. ATCC 51142 chromosome circular, complete sequencephycocyanin associated linker protein2e-1789.4
NC_009482:1761529:1767560176756017692001641Synechococcus sp. RCC307 chromosome, complete genomephycobilisome linker polypeptide, C-phycoerythrin class I and II-associated6e-1787.8
NC_007516:413159:4362334362334378821650Synechococcus sp. CC9605, complete genomephycobilisome linker polypeptide1e-1686.7
NC_011726:3205278:321802832180283218849822Cyanothece sp. PCC 8801, complete genomePhycobilisome linker polypeptide2e-1685.9
NC_005070:1898612:1903591190359119052371647Synechococcus sp. WH 8102, complete genomePhycobilisome linker polypeptide2e-1685.9
NC_008319:478499:4979294979294994371509Synechococcus sp. CC9311, complete genomephycobilisome linker polypeptide3e-1685.5
NC_013161:3071105:307909530790953079916822Cyanothece sp. PCC 8802, complete genomePhycobilisome linker polypeptide3e-1685.1
NC_007513:1807184:1808127180812718097671641Synechococcus sp. CC9902, complete genomephycobilisome linker polypeptide4e-1685.1
NC_010296:2200054:221083822108382211653816Microcystis aeruginosa NIES-843, complete genomephycobilisome rod linker polypeptide9e-1684
NC_005125:3420270:342592834259283426587660Gloeobacter violaceus PCC 7421, complete genomephycocyanin-associated rod linker protein1e-1583.6
NC_007513:1807184:180985618098561810590735Synechococcus sp. CC9902, complete genomepossible phycobilisome linker polypeptide5e-1581.3
NC_007513:438438:461014461014461910897Synechococcus sp. CC9902, complete genomehypothetical protein2e-1479.7
NC_013161:3071105:307817530781753079053879Cyanothece sp. PCC 8802, complete genomePhycobilisome linker polypeptide2e-1479.3
NC_011726:3205278:321889132188913219769879Cyanothece sp. PCC 8801, complete genomePhycobilisome linker polypeptide2e-1479.3
NC_010546:2711929:272158327215832722542960Cyanothece sp. ATCC 51142 chromosome circular, complete sequencephycocyanin associated linker protein3e-1479
NC_010296:2200054:221169922116992212577879Microcystis aeruginosa NIES-843, complete genomephycobilisome rod linker polypeptide6e-1477.8
NC_005070:1898612:190531219053121906046735Synechococcus sp. WH 8102, complete genomepossible phycobilisome linker polypeptide5e-1477.8
NC_007516:413159:437938437938438822885Synechococcus sp. CC9605, complete genomephycobilisome linker polypeptide7e-1477.4
NC_009482:1761529:176662617666261767504879Synechococcus sp. RCC307 chromosome, complete genomephycobilisome linker polypeptide, C-phycoerythrin class I-associated1e-1376.6
NC_007516:413159:435423435423436157735Synechococcus sp. CC9605, complete genomepossible phycobilisome linker polypeptide1e-1376.6
NC_005070:1898612:190265119026511903535885Synechococcus sp. WH 8102, complete genomephycobilisome linker polypeptide4e-1375.1
NC_008319:478499:497117497117497851735Synechococcus sp. CC9311, complete genomepossible phycobilisome linker polypeptide4e-1375.1
NC_007513:1807184:181610218161021816986885Synechococcus sp. CC9902, complete genomeC-phycoerythrin class II gamma chain, linker polypeptide6e-1374.7
NC_009482:1761529:176928217692821770016735Synechococcus sp. RCC307 chromosome, complete genomephycobilisome linker polypeptide, C-phycoerythrin class I-associated7e-1374.3
NC_007513:1807184:180718418071841808068885Synechococcus sp. CC9902, complete genomephycobilisome linker polypeptide3e-1272.4
NC_009482:1761529:177537617753761776257882Synechococcus sp. RCC307 chromosome, complete genomeC-phycoerythrin class II gamma chain, linker5e-1271.6
NC_008319:478499:490716490716491444729Synechococcus sp. CC9311, complete genomePhycoerythrin class II gamma chain, linker polypeptide7e-1270.9
NC_008319:478499:499633499633500517885Synechococcus sp. CC9311, complete genomephycobilisome linker polypeptide3e-1168.9
NC_007516:413159:428840428840429706867Synechococcus sp. CC9605, complete genomeC-phycoerythrin class II gamma chain, linker polypeptide7e-1167.4
NC_005070:1898612:191174119117411912622882Synechococcus sp. WH 8102, complete genomeC-phycoerythrin class II gamma chain, linker polypeptide2e-1066.2