Pre_GI: BLASTP Hits

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Query: NC_010475:2188827:2203037 Synechococcus sp. PCC 7002, complete genome

Start: 2203037, End: 2203369, Length: 333

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011729:4073761:407376140737614074090330Cyanothece sp. PCC 7424 chromosome, complete genomeanti-sigma-factor antagonist3e-1890.5
NC_009925:1109770:112489711248971125223327Acaryochloris marina MBIC11017, complete genomeanti-sigma-factor antagonist1e-1271.6
NC_009616:1604276:161012816101281610460333Thermosipho melanesiensis BI429 chromosome, complete genomeanti-sigma-factor antagonist6e-0959.7
NC_007484:3358000:336341133634113363746336Nitrosococcus oceani ATCC 19707, complete genomeAnti-sigma factor antagonist1e-0858.9
NC_010814:2217153:224222722422272242562336Geobacter lovleyi SZ, complete genomeanti-sigma-factor antagonist3e-0857
NC_014315:3207684:321372232137223214057336Nitrosococcus watsoni C-113 chromosome, complete genomeanti-sigma-factor antagonist4e-0856.6
NC_010475:2537500:255070225507022551178477Synechococcus sp. PCC 7002, complete genomeanti-sigma factor antagonist6e-0752.8
NC_011898:426951:451241451241451558318Clostridium cellulolyticum H10, complete genomeanti-sigma-factor antagonist1e-0652
NC_013501:1691532:169470316947031695074372Rhodothermus marinus DSM 4252, complete genomeanti-sigma-factor antagonist1e-0652
NC_019904:5526000:553923155392315539575345Echinicola vietnamensis DSM 17526 chromosome, complete genomeanti-anti-sigma regulatory factor2e-0651.2
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0650.8
NC_012225:2474042:248566824856682486003336Brachyspira hyodysenteriae WA1, complete genomeanti-sigma factor antagonist5e-0650.1
NC_006582:883922:885435885435885764330Bacillus clausii KSM-K16, complete genomepositive regulator of sigma-B activity6e-0649.7
NC_013223:1763631:176702317670231767382360Desulfohalobium retbaense DSM 5692, complete genomeanti-sigma-factor antagonist8e-0649.3