Pre_GI: BLASTP Hits

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Query: NC_010475:1161000:1177107 Synechococcus sp. PCC 7002, complete genome

Start: 1177107, End: 1177580, Length: 474

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019757:3492500:350557135055713506047477Cylindrospermum stagnale PCC 7417, complete genomeNADH-quinone oxidoreductase cyanobacterial subunit N3e-53206
NC_008312:4643190:466086946608694661345477Trichodesmium erythraeum IMS101, complete genomeNADH dehydrogenase I subunit N2e-52204
NC_019771:4459000:446288844628884463364477Anabaena cylindrica PCC 7122, complete genomeNAD(P)H-quinone oxidoreductase subunit N4e-52203
NC_003272:5040500:505325450532545053742489Nostoc sp. PCC 7120, complete genomehypothetical protein1e-51201
NC_007413:868678:872691872691873179489Anabaena variabilis ATCC 29413, complete genomeNADH dehydrogenase I subunit N3e-51200
NC_017277:1717637:171945717194571719942486Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-50197
NC_017052:1717836:171965617196561720141486Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-50197
NC_017039:1717848:171966817196681720153486Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-50197
NC_000911:1718820:172064017206401721125486Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-50197
NC_014248:2654471:266276426627642663240477Nostoc azollae 0708 chromosome, complete genomeNADH dehydrogenase I subunit N7e-50196
NC_011884:393328:407083407083407559477Cyanothece sp. PCC 7425, complete genomeNADH dehydrogenase I subunit N, putative7e-46182
NC_009925:1617414:162058616205861621041456Acaryochloris marina MBIC11017, complete genomeNADH dehydrogenase I subunit N, putative9e-44175
NC_008819:1635838:164795916479591648423465Prochlorococcus marinus str. NATL1A, complete genomeNADH dehydrogenase I subunit N5e-32136
NC_007335:1053876:106698610669861067450465Prochlorococcus marinus str. NATL2A, complete genomeNADH dehydrogenase I subunit N6e-32136
NC_008820:2027977:203332120333212033782462Prochlorococcus marinus str. MIT 9303, complete genomeNADH dehydrogenase I subunit N4e-31133
NC_007577:1517000:153908415390841539560477Prochlorococcus marinus str. MIT 9312, complete genomeNADH dehydrogenase I subunit N2e-30131
NC_008816:1476209:149878414987841499260477Prochlorococcus marinus str. AS9601, complete genomeNADH dehydrogenase I subunit N5e-30129
NC_005042:1552074:156529815652981565756459Prochlorococcus marinus subsp. marinus str. CCMP1375, completehypothetical protein1e-28125