Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:4643190 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46431904643540351ribosomal protein L17QuickGO ontologyBLASTP
46436914644656966DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
46446814645076396ribosomal protein S11QuickGO ontologyBLASTP
46458374646220384ribosomal protein S13QuickGO ontologyBLASTP
46463094646422114ribosomal protein L36QuickGO ontology
46465334646757225translation initiation factor IF-1QuickGO ontologyBLASTP
46469854647560576adenylate kinasesQuickGO ontologyBLASTP
464756046489001341preprotein translocase SecY subunitQuickGO ontologyBLASTP
46490174649502486ribosomal protein L15QuickGO ontologyBLASTP
46497584650291534ribosomal protein S5QuickGO ontologyBLASTP
46504424650804363ribosomal protein L18QuickGO ontologyBLASTP
46508084651347540ribosomal protein L6QuickGO ontologyBLASTP
46515724651973402ribosomal protein S8QuickGO ontologyBLASTP
46520024652547546ribosomal protein L5QuickGO ontologyBLASTP
46526474653015369ribosomal protein L24QuickGO ontologyBLASTP
46530154653383369ribosomal protein L14QuickGO ontologyBLASTP
46535044653755252ribosomal protein S17QuickGO ontologyBLASTP
46538964654144249ribosomal protein L29QuickGO ontologyBLASTP
46541484654561414ribosomal protein L16QuickGO ontologyBLASTP
46547354655463729ribosomal protein S3QuickGO ontologyBLASTP
46555204655879360ribosomal protein L22QuickGO ontologyBLASTP
46560184656293276ribosomal protein S19QuickGO ontologyBLASTP
46564674657330864ribosomal protein L2QuickGO ontologyBLASTP
46573974657702306Ribosomal protein L25L23QuickGO ontologyBLASTP
46576924658330639ribosomal protein L4L1eQuickGO ontologyBLASTP
46583534659036684ribosomal protein L3QuickGO ontologyBLASTP
46608694661345477NADH dehydrogenase I subunit NQuickGO ontologyBLASTP