Pre_GI: BLASTP Hits

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Query: NC_010407:2406113:2408845 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 2408845, End: 2410743, Length: 1899

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015145:3236445:3260551326055132623261776Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein1e-72275
NC_008711:3454359:3477578347757834794431866Arthrobacter aurescens TC1, complete genomehypothetical protein1e-64248
NC_018531:3625810:3646879364687936487441866Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein1e-63244
NC_013235:5849659:5866679586667958685171839Nakamurella multipartita DSM 44233, complete genomehypothetical protein8e-53208
NC_014151:813755:8189078189078208501944Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein2e-50201
NC_008699:4443000:4464696446469644663961701Nocardioides sp. JS614, complete genomehypothetical protein2e-46187
NC_008726:1776192:1782909178290917847651857Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein8e-46185
NC_014656:1161188:1185201118520111869641764Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein3e-42174
NC_013530:3204825:3229246322924632310991854Xylanimonas cellulosilytica DSM 15894, complete genomehypothetical protein2e-41171
NC_014814:4326500:4337598433759843393221725Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein1e-39165
NC_008618:1729739:1749320174932017512931974Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein1e-38161
NC_014659:4299552:4318471431847143203211851Rhodococcus equi 103S, complete genomemembrane protein3e-38160
NC_015389:1375315:1397117139711713993242208Coriobacterium glomerans PW2 chromosome, complete genomehypothetical protein2e-37157
NC_016906:1268606:1289602128960212914071806Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein1e-36155
NC_009077:1027357:1036253103625310380191767Mycobacterium sp. JLS, complete genomehypothetical protein7e-36152
NC_012522:5952307:5966648596664859684801833Rhodococcus opacus B4, complete genomehypothetical protein9e-35149
NC_014151:813755:8378928378928397511860Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein2e-33144
NC_015067:459626:4627684627684646961929Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein6e-33142
NC_014169:2234249:2258495225849522607382244Bifidobacterium longum subsp. longum JDM301 chromosome, completehypothetical protein6e-31136
NC_004307:1815825:1815825181582518180922268Bifidobacterium longum NCC2705, complete genomehypothetical protein1e-30135
NC_015052:2181514:2208697220869722108022106Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-30135
NC_017221:73864:7770877708798132106Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein1e-30135
NC_010816:1852406:1855377185537718575272151Bifidobacterium longum DJO10A, complete genomehypothetical protein1e-30135
NC_014656:1829336:1832352183235218344752124Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein9e-31135
NC_017219:2646157:2669027266902726710662040Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-29131
NC_011593:2650156:2673026267302626752692244Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein3e-29130
NC_011835:733320:7840967840967859251830Bifidobacterium animalis subsp. lactis AD011 chromosome, completemethyl-accepting chemotaxis protein4e-28127
NC_012814:1599241:1653169165316916549381770Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein3e-28127
NC_012815:1603916:1652887165288716546561770Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein3e-28127
NC_017217:1607679:1658456165845616602251770Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein3e-28127
NC_017214:299637:3503753503753522461872Bifidobacterium animalis subsp. lactis BB-12 chromosome, completehypothetical protein3e-28127
NC_017215:1605917:1657790165779016596611872Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein3e-28127
NC_017216:1603000:1652815165281516544701656Bifidobacterium animalis subsp. lactis BLC1, complete genomehypothetical protein4e-27123
NC_013714:2294342:2311332231133223131401809Bifidobacterium dentium Bd1, complete genomehypothetical protein2e-22108
NC_018720:2097694:2118860211886021207311872Bifidobacterium asteroides PRL2011 chromosome, complete genomehypothetical protein5e-22106
NC_017215:1605917:1616105161610516180301926Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein3e-21103
NC_017214:299637:3087113087113106361926Bifidobacterium animalis subsp. lactis BB-12 chromosome, completehypothetical protein3e-21103
NC_017216:1603000:1611116161111616130051890Bifidobacterium animalis subsp. lactis BLC1, complete genomehypothetical protein3e-21103
NC_011835:733320:7423997423997440751677Bifidobacterium animalis subsp. lactis AD011 chromosome, completemethyl-accepting chemotaxis protein6e-21103
NC_012815:1603916:1611189161118916128561668Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein6e-21102
NC_012814:1599241:1611471161147116131381668Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein6e-21102
NC_017217:1607679:1616758161675816184251668Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein6e-21102
NC_012780:242500:2497252497252515901866Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein2e-1688.2
NC_009664:1195630:1199417119941712011351719Kineococcus radiotolerans SRS30216, complete genomehypothetical protein3e-0757.4