Pre_GI: BLASTP Hits

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Query: NC_010407:1114408:1122357 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 1122357, End: 1122698, Length: 342

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:2726816:273853027385302738862333Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-2098.6
NC_015953:2512152:251771025177102518045336Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein1e-2098.6
NC_003155:6444500:644944164494416449773333Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1891.3
NC_003155:5005913:501479250147925015124333Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1890.9
NC_013929:6526745:653086265308626531194333Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1684.3
NC_018524:2338000:235295623529562353285330Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein2e-1477.8