Pre_GI: BLASTP Hits

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Query: NC_010334:1701957:1712142 Shewanella halifaxensis HAW-EB4, complete genome

Start: 1712142, End: 1714655, Length: 2514

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:3048490:3061039306103930623221284Escherichia coli UMN026 chromosome, complete genomeputative Signal transduction histidine kinase9e-99362
NC_011751:3048490:3059798305979830610001203Escherichia coli UMN026 chromosome, complete genomeputative ERCC4-like helicase3e-87323
NC_016584:954000:9723979723979749432547Desulfosporosinus orientis DSM 765 chromosome, complete genomesuperfamily II helicase8e-62239
NC_015633:1702000:1719470171947017219952526Vibrio anguillarum 775 chromosome chromosome I, complete sequenceATP-dependent DNA helicase3e-50200
NC_014393:2868846:2868846286884628713472502Clostridium cellulovorans 743B chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-45185
NC_015697:506494:5064945064945091062613Lactobacillus reuteri SD2112 chromosome, complete genomehypothetical protein2e-42175
NC_009050:427000:4364524364524390582607Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein3e-42174
NC_014623:9038177:9042672904267290452992628Stigmatella aurantiaca DW4/3-1 chromosome, complete genomedead/deah box helicase domain-containing protein3e-42174
NC_014828:1932971:1944957194495719476892733Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelicase domain protein2e-42174
NC_013521:2193203:2201802220180222043602559Sanguibacter keddieii DSM 10542, complete genomesuperfamily II helicase1e-40169
NC_014323:5051041:5059892505989250624652574Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA helicase4e-36153
NC_020209:4312892:4319205431920543218352631Pseudomonas poae RE*1-1-14, complete genomedead/deah box helicase domain-containing protein4e-33143
NC_014500:443874:4534484534484560242577Dickeya dadantii 3937 chromosome, complete genomehelicase conserved C-terminal domain-containing protein3e-30134
NC_011080:4703266:4711108471110847136572550Salmonella enterica subsp. enterica serovar Newport str. SL254,putative dead/deah box helicase domain protein1e-28129
NC_008782:2568027:2579272257927225818422571Acidovorax sp. JS42, complete genomeDEAD/DEAH box helicase domain protein8e-27122
NC_015948:2367000:2374592237459223771982607Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDEAD/DEAH box helicase domain-containing protein3e-25117
NC_008321:3964414:3973198397319839753512154Shewanella sp. MR-4, complete genomeDEAD/DEAH box helicase domain protein2e-23112
NC_012912:1701231:1710394171039417126702277Dickeya zeae Ech1591, complete genomehelicase domain protein2e-22108
NC_010334:2615260:2629510262951026317862277Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein3e-22107
NC_016612:5296076:5309195530919553116512457Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDNA helicase-like protein6e-22107
NC_009848:3631243:3638676363867636411232448Bacillus pumilus SAFR-032, complete genomeDNA helicase3e-21104
NC_016026:1969766:1984257198425719867912535Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehelicase domain-containing protein5e-20100
NC_014623:4683671:4708241470824147097761536Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA/RNA helicase1e-1999.4
NC_017249:7917586:792160279216027922600999Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1894.7
NC_015410:2258800:2270898227089822730902193Pseudomonas mendocina NK-01 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-1894.7
NC_007519:791679:8025588025588046572100Desulfovibrio alaskensis G20 chromosome, complete genomehelicase-like2e-1792
NC_011979:3070110:3078571307857130810242454Geobacter sp. FRC-32, complete genomeDEAD-like helicase1e-1689.4
NC_020829:2754203:2764299276429927672832985Pseudomonas denitrificans ATCC 13867, complete genomeDEAD/DEAH box helicase1e-1689
NC_015977:3011177:3022825302282530260643240Roseburia hominis A2-183 chromosome, complete genomehypothetical protein6e-1687
AC_000091:2747520:2760007276000727621962190Escherichia coli W3110 DNA, complete genomehypothetical protein1e-1585.9
NC_010473:2839902:2851138285113828533272190Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; conserved protein1e-1585.9
NC_000913:2746886:2759373275937327615622190Escherichia coli K12, complete genomeCP4-57 prophage; conserved protein1e-1585.9
NC_012759:2633949:2645185264518526473742190Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein1e-1585.9
NC_010995:4525119:4539346453934645425793234Cellvibrio japonicus Ueda107, complete genomeDEAD/DEAH box helicase7e-1583.6
NC_019791:638500:6490656490656511852121Caldisphaera lagunensis DSM 15908 chromosome, complete genomesuperfamily II helicase2e-1481.6
NC_008800:2806827:2848733284873328504961764Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-1480.5
NC_011283:1811000:1824430182443018266282199Klebsiella pneumoniae 342 chromosome, complete genomehelicase1e-1379.3
NC_008698:435885:4504834504834527022220Thermofilum pendens Hrk 5, complete genomeDEAD/DEAH box helicase domain protein3e-1377.8
NC_009049:2131017:2148890214889021510252136Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencehelicase domain protein5e-1377
NC_009434:695582:7097267097267121912466Pseudomonas stutzeri A1501, complete genomehypothetical protein6e-1376.6
NC_014253:142026:1803571803571825582202Methanohalobium evestigatum Z-7303 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-1171.2
NC_012559:1497548:1508696150869615108372142Laribacter hongkongensis HLHK9, complete genomeSuperfamily II helicase5e-1170.5
NC_002578:877609:8969148969148989382025Thermoplasma acidophilum DSM 1728, complete genomeski2-like helicase7e-1170.1
NC_016884:1201868:1210037121003712130603024Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeDEAD/DEAH box helicase8e-1169.7
NC_015757:2459424:2465204246520424682273024Sulfobacillus acidophilus TPY chromosome, complete genomeSKI2-family helicase8e-1169.7
NC_004463:2344128:235958323595832360407825Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-1069.3
NC_016943:1422926:1437021143702114389431923Blastococcus saxobsidens DD2, complete genomeputative helicase2e-1068.2
NC_021184:3149000:3154397315439731564692073Desulfotomaculum gibsoniae DSM 7213, complete genomesuperfamily II helicase3e-1068.2
NC_014961:445717:4477564477564499002145Desulfurococcus mucosus DSM 2162 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-1067
NC_007951:2904644:2929804292980429324522649Burkholderia xenovorans LB400 chromosome 1, complete sequenceHelicase-like protein1e-0966.2
NC_012588:211633:2155952155952177422148Sulfolobus islandicus M.14.25 chromosome, complete genomeDEAD/DEAH box helicase1e-0965.9
NC_015312:1265797:1328324132832413318363513Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-0965.5
NC_009446:174951:1815521815521849443393Dichelobacter nodosus VCS1703A, complete genomeDEAD-DEAH box helicase domain-containing protein VrlS2e-0965.1
NC_009076:3765441:3798020379802038016703651Burkholderia pseudomallei 1106a chromosome I, complete sequencehelicase, C-terminal:dead/deah box helicase, n-terminal7e-0963.5
NC_013158:1620761:1641383164138316437852403Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein8e-0963.2
NC_012214:1650523:1661327166132716634592133Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0862.4
NC_013515:715009:7481577481577512553099Streptobacillus moniliformis DSM 12112, complete genomeDEAD/DEAH box helicase domain protein6e-0860.5
NC_012918:1697860:1712873171287317141651293Geobacter sp. M21 chromosome, complete genomeDEAD/DEAH box helicase5e-0860.5
NC_007777:2638580:2638580263858026412372658Frankia sp. CcI3, complete genomeDEAD/DEAH box helicase-like5e-0860.5
NC_000868:834872:8474058474058495522148Pyrococcus abyssi GE5, complete genomeski2-like helicase7e-0860.1
NC_008278:4023918:4055173405517340578092637Frankia alni ACN14a, complete genomeputative ATP-dependent helicase9e-0859.7
NC_009050:427000:4302924302924339033612Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein2e-0758.9
NC_015565:624298:6477356477356492911557Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDSH domain-containing protein2e-0758.5
NC_009997:2352948:2369163236916323723573195Shewanella baltica OS195, complete genomeDEAD/DEAH box helicase domain protein1e-0655.8
NC_008095:5527707:5540692554069255442523561Myxococcus xanthus DK 1622, complete genomeATP-dependent helicase, DEAD/DEAH box family2e-0655.1