Pre_GI: BLASTP Hits

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Query: NC_010322:6037566:6069747 Pseudomonas putida GB-1 chromosome, complete genome

Start: 6069747, End: 6070154, Length: 408

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:5955467:598438059843805984787408Pseudomonas putida S16 chromosome, complete genomeF0F1 ATP synthase subunit I8e-58221
NC_002947:6152500:618145361814536181860408Pseudomonas putida KT2440, complete genomeATP synthase subunit I1e-57221
NC_009512:5920960:595039759503975950804408Pseudomonas putida F1, complete genomeATP synthase I chain1e-57221
NC_010501:5735656:576489757648975765304408Pseudomonas putida W619, complete genomeATP synthase I chain2e-57220
NC_007492:6372900:642912764291276429534408Pseudomonas fluorescens PfO-1, complete genomeATP synthase I chain3e-48190
NC_007005:6056765:608382560838256084232408Pseudomonas syringae pv. syringae B728a, complete genomeATP synthase subunit I2e-46184
NC_005966:159232:178542178542178940399Acinetobacter sp. ADP1, complete genomeATP synthase protein I1e-1168.2