Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:1520973:1529343 Pseudomonas putida GB-1 chromosome, complete genome

Start: 1529343, End: 1530386, Length: 1044

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1887275:1895604189560418966531050Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative chain length determinant protein1e-59230
NC_008027:1559083:1570238157023815712781041Pseudomonas entomophila L48, complete genomeO-antigen chain length regulator protein (Wzz)2e-59229
NC_016830:1901488:1909883190988319109291047Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-53209
NC_018080:1834754:1844025184402518450531029Pseudomonas aeruginosa DK2 chromosome, complete genomeO-antigen chain length regulator2e-49196
NC_009656:1994392:2003647200364720046961050Pseudomonas aeruginosa PA7 chromosome, complete genomeO-antigen chain length regulator4e-49195
NC_008463:2017607:2026846202684620279281083Pseudomonas aeruginosa UCBPP-PA14, complete genomeO-antigen chain length regulator6e-47188
NC_011770:2046490:2055868205586820568691002Pseudomonas aeruginosa LESB58, complete genomeO-antigen chain length regulator1e-42173
NC_020829:5174354:520016652001665201053888Pseudomonas denitrificans ATCC 13867, complete genomeO-antigen chain length regulator3e-39162
NC_015740:2587323:2606365260636526075281164Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative chain length determinant protein6e-0755.5