Pre_GI: BLASTP Hits

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Query: NC_010162:8585856:8596835 Sorangium cellulosum 'So ce 56', complete genome

Start: 8596835, End: 8597887, Length: 1053

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010162:12224154:1225082612250826122519471122Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor8e-80297
NC_010162:11812211:1182001711820017118211111095Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor8e-74277
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor2e-0860.8
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative2e-0860.8
NC_014664:1360524:137481013748101375316507Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0757
NC_010162:8585856:860173886017388602307570Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-0652.4
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0651.6