Pre_GI: BLASTP Hits

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Query: NC_010162:12224154:12237456 Sorangium cellulosum 'So ce 56', complete genome

Start: 12237456, End: 12241370, Length: 3915

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011831:2213306:2222024222202422263884365Chloroflexus aggregans DSM 9485, complete genomeNB-ARC domain protein6e-36154
NC_011884:2194767:2202739220273922070554317Cyanothece sp. PCC 7425, complete genomeNB-ARC domain protein8e-29130
NC_014666:7152782:7159968715996871638193852Frankia sp. EuI1c chromosome, complete genomeNB-ARC domain protein1e-26122
NC_009926:34848:4440044400469732574Acaryochloris marina MBIC11017 plasmid pREB1, complete sequenceTPR domain protein, putative2e-1999
NC_015951:71697:8481484814870722259Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completehelix-turn-helix domain-containing protein1e-1483.6
NC_013595:4031947:4052565405256540556573093Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, SARP family4e-1378.2
NC_013947:5682895:5695664569566456984052742Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, SARP family1e-1276.6
NC_013595:4796436:4796436479643647994262991Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, SARP family2e-1275.9
NC_013729:380312:3858953858953878261932Kribbella flavida DSM 17836, complete genometranscriptional regulator, SARP family3e-1275.5
NC_013947:1570000:1577359157735915804423084Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, SARP family7e-1273.9
NC_016109:6507076:6527002652700265300583057Kitasatospora setae KM-6054, complete genomeputative AfsR family transcriptional regulator3e-1068.9
NC_009921:4035225:4071324407132440738762553Frankia sp. EAN1pec, complete genomeTetratricopeptide TPR_2 repeat protein4e-1068.2
NC_016109:4199839:4211154421115442143213168Kitasatospora setae KM-6054, complete genomeputative AfsR family transcriptional regulator5e-1067.8
NC_013947:4413382:4426906442690644298572952Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, SARP family1e-0966.6
NC_014210:3170537:3186740318674031891062367Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,NB-ARC domain protein1e-0966.6
NC_011894:6220791:6220791622079162254944704Methylobacterium nodulans ORS 2060, complete genomehypothetical protein2e-0965.9
NC_014318:1537732:1548050154805015507402691Amycolatopsis mediterranei U32 chromosome, complete genomeTPR repeat-containing protein2e-0965.9
NC_019673:2051363:2062718206271820650152298Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0965.5
NC_019673:1275627:1306946130694613101193174Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0965.1
NC_006363:36959:4500745007476552649Nocardia farcinica IFM 10152 plasmid pNF2, complete sequencehypothetical protein4e-0965.1
NC_014391:6710500:6714485671448567171902706Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNB-ARC domain-containing protein4e-0964.7
NC_009974:53865:5386553865567262862Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completeTPR repeat-containing protein8e-0963.9
NC_009973:178000:2127392127392139171179Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completehypothetical protein1e-0863.5
NC_014815:4491413:4511304451130445134482145Micromonospora sp. L5 chromosome, complete genomenb-arc domain protein1e-0863.5
NC_016582:4934854:4947651494765149499512301Streptomyces bingchenggensis BCW-1 chromosome, complete genomeNB-ARC domain-containing protein1e-0863.2
NC_003155:2211087:2212064221206422143222259Streptomyces avermitilis MA-4680, complete genomeregulatory protein1e-0863.2
NC_009953:3509229:3521491352149135234551965Salinispora arenicola CNS-205 chromosome, complete genomeSARP family transcriptional regulator2e-0862.8
NC_008271:35909:5350253502567713270Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprotein kinase/ transcriptional regulator, LuxR family2e-0862.8
NC_014318:6539137:6543395654339565461842790Amycolatopsis mediterranei U32 chromosome, complete genomeSARP family transcriptional regulator3e-0862.4
NC_017186:6539181:6543439654343965462282790Amycolatopsis mediterranei S699 chromosome, complete genomeSARP family transcriptional regulator3e-0862.4
NC_013510:517878:5243015243015271262826Thermomonospora curvata DSM 43183, complete genomeNB-ARC domain protein3e-0862
NC_008278:2732890:2752317275231727554123096Frankia alni ACN14a, complete genomeputative regulatory protein (AfsR-like protein)5e-0861.2
NC_013093:3068486:3110811311081131133272517Actinosynnema mirum DSM 43827, complete genomeNB-ARC domain protein5e-0861.2
NC_019673:2051363:2124570212457021267232154Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator7e-0860.8
NC_018681:5627940:5635807563580756376601854Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein8e-0860.5
NC_013440:811780:8253318253318290173687Haliangium ochraceum DSM 14365, complete genomeHI0933 family protein1e-0759.7
NC_013093:626473:6338026338026366422841Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, SARP family1e-0759.7
NC_013947:656140:6737986737986762182421Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family2e-0759.3
NC_009921:5681677:5687555568755556895822028Frankia sp. EAN1pec, complete genomeputative ATP/GTP binding protein5e-0758.2
NC_012522:98567:1091781091781114962319Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator6e-0757.8
NC_013595:3712257:3713298371329837163603063Streptosporangium roseum DSM 43021, complete genometranscriptional regulator, SARP family7e-0757.4
NC_014666:4118000:4133155413315541372824128Frankia sp. EuI1c chromosome, complete genomeNB-ARC domain protein8e-0757
NC_012522:3224526:3224526322452632277893264Rhodococcus opacus B4, complete genomeputative serine/threonine protein kinase2e-0656.2
NC_009973:178000:2139952139952173123318Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeTPR repeat-containing protein4e-0655.1
NC_019673:6473743:6483586648358664864052820Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, SARP family6e-0654.3
NC_013929:3206688:3219589321958932214991911Streptomyces scabiei 87.22 chromosome, complete genomeAfsR family transcriptional regulator1e-0553.5