Pre_GI: BLASTP Hits

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Query: NC_010102:931055:936179 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 936179, End: 937405, Length: 1227

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1107998:1113842111384211150681227Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0814
NC_011294:1006630:101381210138121014334523Salmonella enterica subsp. enterica serovar Enteritidis str7e-96351
NC_009436:1141376:1148782114878211502001419Enterobacter sp. 638, complete genomehypothetical protein3e-71269
NC_011001:2085986:2123895212389521251031209Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein7e-50198
NC_018607:135612:1559261559261571431218Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein3e-2099.8
NC_016077:1944000:1965038196503819661051068Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein3e-0653.5