Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4567974 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4567974, End: 4568282, Length: 309

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:3303955:330756133075613307869309Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein5e-34142
NC_012214:537000:550989550989551297309Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein5e-34142
NC_016816:4129299:417543641754364175744309Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-30131
NC_014121:489500:508517508517508813297Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-28124
NC_003198:4453457:446472244647224465231510Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-0755.5
NC_004547:639726:651458651458651814357Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0755.5
NC_012125:4536383:454786845478684548203336Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-0755.1
NC_016832:4425330:443680244368024437104303Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-0755.1
NC_015566:345084:370035370035370415381Serratia sp. AS12 chromosome, complete genomehypothetical protein3e-0753.9
NC_015567:346500:370221370221370601381Serratia sp. AS9 chromosome, complete genomehypothetical protein3e-0753.9