Pre_GI: BLASTP Hits

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Query: NC_010102:4557037:4563222 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4563222, End: 4564367, Length: 1146

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009705:78000:8379483794849121119Yersinia pseudotuberculosis IP 31758 plasmid_153kb, completeputative conjugal transfer protein TraE2e-66253
NC_013421:701005:740782740782741777996Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-1995.9
NC_004547:611178:618090618090618890801Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid transfer protein2e-1584
NC_016816:4129299:413177041317704132759990Pantoea ananatis LMG 5342, complete genomeputative type IV pilus protein, TraE3e-1479.7
NC_011745:3443371:344557434455743446395822Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-1376.3
NC_010102:4557037:4575596457559645766121017Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1271.6
NC_014121:489500:520505520505521494990Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0653.5