Pre_GI: BLASTP Hits

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Query: NC_010102:2178594:2193273 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2193273, End: 2193407, Length: 135

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:894955:899831899831899965135Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-1785.5
NC_011205:944125:949001949001949135135Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein9e-1785.5
NC_011080:924326:929202929202929336135Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein9e-1785.5
NC_011083:967260:972136972136972270135Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein9e-1785.5
NC_016831:2108557:212327121232712123405135Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1685.1
NC_016857:919266:924142924142924276135Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein7e-1682.4
NC_016856:921057:925933925933926067135Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-1682.4