Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1157096 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1157096, End: 1157221, Length: 126

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1903426:192005219200521920177126Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74arsenical pump membrane protein1e-1478.6
NC_016831:1690811:170742417074241707549126Salmonella enterica subsp. enterica serovar Gallinarum/pullorumarsenical pump membrane protein1e-1478.6
NC_011094:1923870:193936219393621939487126Salmonella enterica subsp. enterica serovar Schwarzengrund strarsenical pump membrane protein1e-1478.6
NC_011083:1993672:201030720103072010432126Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,arsenical pump membrane protein1e-1478.6
NC_011080:1944226:196749119674911967616126Salmonella enterica subsp. enterica serovar Newport str. SL254,arsenical pump membrane protein1e-1478.6
NC_011205:1391971:140511914051191405244126Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853arsenical pump membrane protein5e-1476.3