Pre_GI: BLASTP Hits

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Query: NC_010067:2488141:2494823 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2494823, End: 2494972, Length: 150

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:383441:405862405862406056195Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1373.6
NC_012125:373630:396051396051396245195Salmonella enterica subsp. enterica serovar Paratyphi C straincopper chaperone4e-1373.6
NC_011274:376970:399390399390399584195Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91metal-binding transport protein4e-1373.6
NC_011083:403022:448529448529448723195Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-1373.6
NC_011149:361765:384199384199384393195Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-1373.6
NC_016832:2581145:258483625848362585030195Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1373.2