Pre_GI: BLASTP Hits

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Query: NC_010067:191190:194213 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 194213, End: 194431, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:2755338:2769913276991327710881176Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-27119
NC_012912:2901021:2923965292396529251881224Dickeya zeae Ech1591, complete genome8e-27119
NC_012912:3749156:3757269375726937584621194Dickeya zeae Ech1591, complete genometransposase IS4 family protein6e-23105
NC_012912:2285778:2306875230687523080681194Dickeya zeae Ech1591, complete genometransposase IS4 family protein7e-23105
NC_004337:309833:3210023210023221921191Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-2098.6
NC_004741:310382:3197293197293209191191Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-2098.6
NC_008253:3941938:397610639761063976387282Escherichia coli 536, complete genomehypothetical protein5e-2096.7
NC_016856:921057:926622926622926762141Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-0855.5
NC_010102:2178594:219257721925772192717141Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-0855.5