Pre_GI: BLASTP Hits

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Query: NC_010001:4730000:4751394 Clostridium phytofermentans ISDg, complete genome

Start: 4751394, End: 4755689, Length: 4296

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:137064:1370641370641422595196Eubacterium eligens ATCC 27750, complete genomePolysaccharide Lyase Family 9 candidate pectate lyase with C-terminal cell surface anchor0736
NC_015516:1518000:1536422153642215385782157Melissococcus plutonius ATCC 35311, complete genomesurface protein1e-136488
NC_014657:2236193:2236193223619322413285136Caldicellulosiruptor owensensis OL chromosome, complete genomepectate disaccharide-lyase1e-113411
NC_015732:684000:7005457005457035022958Spirochaeta caldaria DSM 7334 chromosome, complete genomePectate disaccharide-lyase2e-108394
NC_013521:2924540:2948751294875129514742724Sanguibacter keddieii DSM 10542, complete genomehypothetical protein6e-97356
NC_010001:4730000:4736925473692547442987374Clostridium phytofermentans ISDg, complete genomeEndo-1,4-beta-xylanase2e-92342
NC_015949:1301004:1308141130814113110922952Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometype 3a cellulose-binding domain-containing protein7e-64246
NC_012034:1925983:1933527193352719354881962Anaerocellum thermophilum DSM 6725, complete genomePectate disaccharide-lyase2e-59231
NC_013093:5734002:5747669574766957493991731Actinosynnema mirum DSM 43827, complete genomeRicin B lectin1e-54216
NC_012912:4737703:4737703473770347399072205Dickeya zeae Ech1591, complete genomeexopolygalacturonate lyase9e-49196
NC_004431:279868:2941762941762964822307Escherichia coli CFT073, complete genomePutative exopolygalacturonate lyase7e-45183
NC_009655:1626466:1632124163212416343462223Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein1e-44182
NC_013592:1668092:1686188168618816874651278Dickeya dadantii Ech586, complete genomeparallel beta-helix repeat protein1e-33146
NC_012912:1701231:1746038174603817473151278Dickeya zeae Ech1591, complete genomeParallel beta-helix repeat protein3e-31138
NC_014500:3097362:3099496309949631007731278Dickeya dadantii 3937 chromosome, complete genomepectate lyase pelL7e-31137
NC_010172:3946644:3957548395754839591911644Methylobacterium extorquens PA1, complete genomeHemolysin-type calcium-binding region3e-22108
NC_012778:1778654:180172118017211802620900Eubacterium eligens ATCC 27750, complete genomePolysaccharide Lyase Family 9-like pectate lyase1e-1896.7
NC_010571:2423732:2427838242783824292141377Opitutus terrae PB90-1, complete genomePectate lyase9e-1894
NC_010172:3946644:3955690395569039571651476Methylobacterium extorquens PA1, complete genomepectate lyase L precursor2e-1379.3