Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:1917456:1923808 Clostridium phytofermentans ISDg, complete genome

Start: 1923808, End: 1924149, Length: 342

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:1496500:152232815223281522669342Clostridium botulinum B str. Eklund 17B, complete genomehydrogenase nickel incorporation protein7e-31132
NC_002967:2194829:219783321978332198174342Treponema denticola ATCC 35405, complete genomehydrogenase nickel insertion protein HypA2e-24110
NC_007626:1746475:178144917814491781784336Magnetospirillum magneticum AMB-1, complete genomeHydrogenase nickel incorporation protein hypA1e-1168.6
NC_007517:3524715:355173235517323552064333Geobacter metallireducens GS-15, complete genomeHydrogenase expression/synthesis, HypA4e-1167
NC_021182:1983456:199383119938311994172342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA3e-0960.8
NC_021182:1761789:177248317724831772824342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA3e-0960.8
NC_011666:3001513:302334130233413023682342Methylocella silvestris BL2, complete genomehydrogenase nickel insertion protein HypA7e-0959.3
NC_015565:348941:362919362919363263345Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase nickel incorporation protein hypA8e-0959.3
NC_019940:2834850:283683228368322837185354Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase nickel incorporation protein HypA1e-0858.9
NC_013959:2449315:244898124489812449322342Sideroxydans lithotrophicus ES-1 chromosome, complete genomehydrogenase nickel insertion protein HypA2e-0857.8
NC_016587:523215:550261550261550602342Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencehydrogenase nickel incorporation protein2e-0754.7
NC_003272:784437:806012806012806353342Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein2e-0754.3
NC_014650:1763308:177965217796521779996345Geobacillus sp. Y4.1MC1 chromosome, complete genomehydrogenase nickel insertion protein HypA3e-0753.9
NC_015660:1784553:180087118008711801215345Geobacillus thermoglucosidasius C56-YS93 chromosome, completehydrogenase nickel insertion protein HypA3e-0753.9
NC_007413:5742406:576257157625715762912342Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/synthesis, HypA3e-0753.9
NC_011740:2986514:300179330017933002134342Escherichia fergusonii ATCC 35469, complete genomeprotein involved with the maturation of hydrogenases 1 and 21e-0652