Pre_GI: BLASTP Hits

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Query: NC_010001:1702350:1706829 Clostridium phytofermentans ISDg, complete genome

Start: 1706829, End: 1707374, Length: 546

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021184:2975975:299411229941122994678567Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator1e-62238
NC_021175:2063611:208180320818032082324522Streptococcus oligofermentans AS 1.3089, complete genomeTetR/AcrR family transcriptional regulator1e-28125
NC_017195:2498113:250271925027192503264546Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, TetR family, putative2e-1375.1
NC_016047:637778:649228649228649773546Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeTetR family transcriptional regulator2e-1375.1
NC_016609:6177651:619097561909756191586612Niastella koreensis GR20-10 chromosome, complete genomeTetR family transcriptional regulator2e-1375.1
NC_016641:5671186:567788656778865678542657Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator9e-1373.2
NC_014976:2735423:276082227608222761367546Bacillus subtilis BSn5 chromosome, complete genomeTetR family transcriptional regulator5e-1270.5
NC_016935:3819500:384780138478013848349549Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-1168.6
NC_014960:115614:129255129255129923669Anaerolinea thermophila UNI-1, complete genomeTetR family transcriptional regulator1e-1066.2
NC_016628:763833:784837784837785361525Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-1065.5
NC_013406:3975512:399704839970483997596549Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator5e-1063.9
NC_011660:366000:381000381000381563564Listeria monocytogenes HCC23 chromosome, complete genomeTetR family transcriptional regulator8e-1063.2
NC_012881:3004784:303061530306153031202588Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, TetR family2e-0858.9
NC_003909:1205605:122160112216011222146546Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family, putative3e-0858.2
NC_016048:1438721:146392114639211464499579Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator3e-0858.2
NC_014364:667841:686921686921687466546Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, TetR family4e-0857.8
NC_003212:2293425:229890822989082299471564Listeria innocua Clip11262, complete genomehypothetical protein4e-0857.8
NC_015737:1441086:145719314571931457834642Clostridium sp. SY8519, complete genometranscriptional regulator4e-0857.4
NC_015578:3266855:328456132845613285229669Treponema primitia ZAS-2 chromosome, complete genomeTetR family transcriptional regulator6e-0857
NC_009142:5579563:560297856029785603583606Saccharopolyspora erythraea NRRL 2338, complete genomeTetR-family transcriptional regulator1e-0756.2
NC_016048:2907702:298652729865272987111585Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator1e-0755.8
NC_016641:3058571:307113930711393071465327Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator1e-0755.8
NC_006274:4408734:442549344254934426110618Bacillus cereus E33L, complete genometranscriptional regulator, TetR family2e-0755.8
NC_003909:4333097:435421743542174354834618Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family4e-0754.3
NC_015759:726612:745904745904746485582Weissella koreensis KACC 15510 chromosome, complete genomeTetR family transcriptional regulator6e-0753.9
NC_004722:4496000:451605545160554516672618Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, TetR family5e-0753.9
NC_015600:1161640:116397211639721164547576Streptococcus pasteurianus ATCC 43144, complete genomeTetR family transcriptional regulator5e-0753.9
NC_004193:375416:664955664955665572618Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator7e-0753.5
NC_011772:4487378:450169645016964502313618Bacillus cereus G9842, complete genometranscriptional regulator, TetR family7e-0753.5
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0652
NC_017347:2724313:274572327457232746310588Staphylococcus aureus subsp. aureus T0131 chromosome, completeDNA-binding protein2e-0652
NC_013790:756000:770737770737771246510Methanobrevibacter ruminantium M1 chromosome, complete genometranscriptional regulator TetR family2e-0652
NC_015738:873653:877241877241877969729Eggerthella sp. YY7918, complete genomehypothetical protein3e-0651.2
NC_021182:3771523:377585437758543776483630Clostridium pasteurianum BC1, complete genometranscriptional regulator3e-0651.2
UCMB5137:2054735:206797320679732068524552Bacillus atrophaeus UCMB-5137TetR family transcriptional regulator4e-0650.8
NC_011837:2567691:257747625774762578195720Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0650.8
NC_020164:89214:911659116591725561Staphylococcus warneri SG1, complete genomehypothetical protein4e-0650.8
NC_013406:5066769:509420850942085094822615Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator7e-0650.1