Pre_GI: BLASTP Hits

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Query: NC_009831:4447919:4451668 Shewanella sediminis HAW-EB3, complete genome

Start: 4451668, End: 4453221, Length: 1554

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009831:4539952:4558047455804745597681722Shewanella sediminis HAW-EB3, complete genomeNitrite reductase (cytochrome; ammonia-forming)0732
NC_014541:1414627:1421166142116614228721707Ferrimonas balearica DSM 9799 chromosome, complete genomeNitrite reductase (cytochrome; ammonia-forming)0695
NC_013421:2972269:2989893298989329913111419Pectobacterium wasabiae WPP163, complete genomeformate-dependent cytochrome c nitrite reductase, c552 subunit2e-79297
NC_012917:2786283:2788528278852827899611434Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeformate-dependent cytochrome c nitrite reductase, c552 subunit2e-79296
NC_008577:2818546:2840377284037728418101434Shewanella sp. ANA-3 chromosome 1, complete sequencecytochrome c5529e-66251
NC_017187:325229:3284043284043298941491Arcobacter butzleri ED-1, complete genomecytochrome c nitrite reductase6e-58225
NC_011830:4473583:4483054448305444843581305Desulfitobacterium hafniense DCB-2, complete genomeNitrite reductase (cytochrome; ammonia-forming)2e-43177
NC_015565:2408669:2430720243072024320031284Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completenitrite reductase1e-33145
NC_017317:2149794:2162360216236021638111452Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-27123
NC_015683:2249949:2262532226253222639831452Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein4e-27123
NC_014218:1619982:1620841162084116223281488Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeNitrite reductase (cytochrome; ammonia-forming)8e-27122
NC_013385:1882549:1893951189395118953601410Ammonifex degensii KC4, complete genomeNitrite reductase (cytochrome; ammonia-forming)1e-20101
NC_010814:190673:1960041960041974551452Geobacter lovleyi SZ, complete genomeNitrite reductase (cytochrome; ammonia-forming)3e-1997.1
NC_014008:3500000:3519264351926435207091446Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeNitrite reductase (cytochrome; ammonia-forming)1e-1791.7
NC_002939:360462:3873513873513889521602Geobacter sulfurreducens PCA, complete genomecytochrome c family protein8e-1789
NC_011146:3376816:3381087338108733825381452Geobacter bemidjiensis Bem, complete genomecytochrome c5523e-1480.5