Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2062900 Escherichia coli HS, complete genome

Start: 2062900, End: 2063292, Length: 393

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:320115:332857332857333174318Escherichia coli HS, complete genomehypothetical protein4e-28123
NC_011283:4170369:418204941820494182369321Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein6e-26115
NC_006905:1342474:135048113504811350789309Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-23108
NC_014121:1357339:137024413702441370564321Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-21100
NC_015968:2845751:286317928631792863496318Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein7e-2199.4
NC_015968:3277217:328520532852053285525321Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein1e-2098.2
NC_014121:1682638:169113516911351691320186Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-1165.9
NC_014306:3524980:353372535337253534045321Erwinia billingiae Eb661, complete genomeputative prophage repressor9e-1165.5
NC_014838:254322:263187263187263510324Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein2e-1064.7
NC_015663:4488058:450077545007754501065291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-0650.1
NC_015663:4735808:474481047448104745100291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-0650.1
NC_013850:1887556:193656619365661936856291Klebsiella variicola At-22 chromosome, complete genomehypothetical protein7e-0649.3