Pre_GI: BLASTP Hits

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Query: NC_009708:4215500:4217863 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4217863, End: 4219509, Length: 1647

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016816:4232680:4234344423434442360561713Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-172606
NC_010102:4477836:4495244449524444969591716Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-164580
NC_014121:398012:4186644186644203701707Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-160565
NC_015567:313035:3130353130353147801746Serratia sp. AS9 chromosome, complete genomehypothetical protein9e-137487
NC_014029:331919:3475603475603492871728Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-136484
NC_009832:358291:3582913582913600271737Serratia proteamaculans 568, complete genomehypothetical protein2e-135483
NC_012125:4481808:4499177449917745009761800Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-135483
NC_016832:4368948:4383914438391443857131800Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-135481
NC_004631:4381724:4396690439669043984891800Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-135481
NC_003198:4397074:4412040441204044138391800Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-135481
NC_004547:590844:5941625941625958861725Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-131469
NC_016845:4539381:4554468455446845560901623Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-129463
NC_009832:4564752:4567747456774745694921746Serratia proteamaculans 568, complete genomehypothetical protein8e-129461
NC_014228:3391500:3409780340978034113631584Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-128457
NC_013892:3278647:3287102328710232886791578Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-127457
NC_013892:1503162:1508598150859815101751578Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-126451
NC_012779:305969:3229303229303245131584Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-121436
NC_014228:3505320:3514724351472435160971374Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-104378
NC_010554:2872000:2881615288161528832641650Proteus mirabilis HI4320, complete genomehypothetical protein2e-87323
NC_008782:1510000:1511814151181415134691656Acidovorax sp. JS42, complete genomehypothetical protein6e-70265
NC_013421:1780722:1802702180270218044261725Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-67257
NC_020181:3328844:3330196333019633316801485Enterobacter aerogenes EA1509E, complete genomeProtein with ParB-like nuclease domain in PFGI-1-like cluster1e-66254
NC_004129:5373886:5386147538614753878201674Pseudomonas fluorescens Pf-5, complete genomehypothetical protein6e-66252
NC_009656:4527457:4585968458596845876951728Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-65249
NC_007086:2477040:2483259248325924849021644Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-64246
NC_010688:2781624:2800877280087728025201644Xanthomonas campestris pv. campestris, complete genomehypothetical protein6e-64245
NC_008344:49039:1188071188071204501644Nitrosomonas eutropha C91, complete genomehypothetical protein1e-63244
NC_015379:2417312:2461743246174324632931551Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-63242
NC_009138:1974935:1985251198525119869151665Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-63242
NC_010170:4463000:4463373446337344650101638Bordetella petrii, complete genomehypothetical protein7e-62238
NC_010170:1324758:1353482135348213552061725Bordetella petrii, complete genomehypothetical protein2e-60233
NC_008463:5246954:5260394526039452621331740Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-59231
NC_018080:5091772:5107082510708251088181737Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-59230
NC_007005:1705406:1717367171736717191271761Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-58225
NC_010519:1963256:1990432199043219920781647Haemophilus somnus 2336 chromosome, complete genomehypothetical protein2e-56220
NC_012913:1041969:1043269104326910450111743Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein3e-56219
NC_015733:2658337:2661173266117326626391467Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-55217
NC_012660:2143376:2149242214924221508281587Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-55216
NC_016830:3869572:3938229393822939398001572Pseudomonas fluorescens F113 chromosome, complete genomeprotein with ParB-like nuclease domain in PFGI-1-like cluster8e-55215
NC_009512:3282500:3303610330361033051481539Pseudomonas putida F1, complete genomehypothetical protein4e-53209
NC_014532:3555550:3555550355555035574631914Halomonas elongata DSM 2581, complete genomehypothetical protein8e-47188
NC_012731:600518:6259256259256271991275Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-46187
NC_009648:5119271:5139577513957751408601284Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein6e-46186
NC_007484:667879:6663606663606678921533Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein3e-38160
NC_009792:3225965:324276232427623243397636Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-32139
NC_008789:707916:719387719387720382996Halorhodospira halophila SL1, complete genomehypothetical protein2e-30134
NC_008752:2936933:2944187294418729458961710Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-20102
NC_011035:829945:8369718369718384611491Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeParB family partitioning protein6e-1996.3
NC_016616:2768053:2771681277168127736211941Dechlorosoma suillum PS chromosome, complete genomehypothetical protein6e-1995.9
NC_009792:4017510:402513140251314025352222Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0757