Pre_GI: BLASTP Hits

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Query: NC_009708:4215500:4215620 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4215620, End: 4216819, Length: 1200

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:4477836:4498932449893245001641233Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-124446
NC_014121:398012:4223464223464235841239Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-117421
NC_014228:3391500:3412393341239334136041212Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-110398
NC_014029:331919:3510313510313523021272Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-110398
NC_009832:4564752:4564752456475245659991248Serratia proteamaculans 568, complete genomehypothetical protein2e-109395
NC_009832:358291:3617403617403630111272Serratia proteamaculans 568, complete genomehypothetical protein2e-108393
NC_013892:3278647:3289715328971532909381224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-108393
NC_014228:3505320:3517133351713335183561224Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-108392
NC_015567:313035:3165053165053177761272Serratia sp. AS9 chromosome, complete genomehypothetical protein4e-108391
NC_015566:316340:3163403163403176111272Serratia sp. AS12 chromosome, complete genomehypothetical protein4e-108391
NC_004547:590844:5972375972375984331197Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-108390
NC_013892:1503162:1506339150633915075621224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-107389
NC_012779:305969:3265393265393277591221Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-105380
NC_016845:4539381:4552667455266745538841218Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-96353
NC_010554:2872000:2878804287880428800991296Proteus mirabilis HI4320, complete genomehypothetical protein4e-92338
NC_004631:4381724:4400559440055944019021344Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-89330
NC_003198:4397074:4415909441590944172521344Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-89330
NC_012125:4481808:4503046450304645043891344Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-89330
NC_016832:4368948:4387783438778343891261344Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-89330
NC_020181:3328844:3332222333222233333551134Enterobacter aerogenes EA1509E, complete genomeFIG141751: hypothetical protein in PFGI-1-like cluster3e-53209
NC_013716:3512950:3551516355151635527211206Citrobacter rodentium ICC168, complete genomehypothetical protein5e-52205
NC_008463:5246954:5262925526292552642501326Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-37157
NC_009656:4527457:4588475458847545898061332Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-37157
NC_010170:1324758:1355781135578113569711191Bordetella petrii, complete genomehypothetical protein2e-36153
NC_015379:2417312:2460021246002124611661146Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-36152
NC_010688:2781624:2803100280310028043261227Xanthomonas campestris pv. campestris, complete genomehypothetical protein7e-36151
NC_007086:2477040:2481453248145324826791227Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein9e-36151
NC_009138:1974935:1987495198749519887451251Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-35150
NC_014532:3555550:3558095355809535594171323Halomonas elongata DSM 2581, complete genomehypothetical protein2e-35150
NC_007005:1705406:1715223171522317165961374Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein8e-35148
NC_004129:5373886:5388485538848553897651281Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-34146
NC_012660:2143376:2147510214751021487001191Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-33144
NC_016830:3869572:3936500393650039376871188Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-33142
NC_010170:1498253:1498817149881715000611245Bordetella petrii, complete genomehypothetical protein3e-32139
NC_008344:49039:1170521170521182271176Nitrosomonas eutropha C91, complete genomehypothetical protein7e-32138
NC_009648:5119271:513817451381745139046873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-30133
NC_012731:600518:624522624522625394873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-30133
NC_012691:2614603:2626374262637426275791206Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-30132
NC_008782:1510000:1510000151000015112351236Acidovorax sp. JS42, complete genomehypothetical protein1e-29131
NC_015733:2658337:2659418265941826606111194Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-28127
NC_002488:1638946:1698842169884217000981257Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-28127
NC_009512:3282500:3305710330571033069271218Pseudomonas putida F1, complete genomehypothetical protein3e-27123
NC_010519:1963256:1988533198853319897231191Haemophilus somnus 2336 chromosome, complete genomehypothetical protein1e-26120
NC_013421:1780722:1800916180091618021301215Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-26120
NC_007484:667879:6684716684716697301260Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein6e-25115
NC_008752:585884:6098056098056110401236Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-24113
NC_002927:960369:9825059825059836891185Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1067.4