Pre_GI: BLASTP Hits

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Query: NC_009708:4182460:4202151 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4202151, End: 4203428, Length: 1278

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:1236988123698812381781191Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-103376
NC_012214:3502992:3507968350796835093801413Erwinia pyrifoliae Ep1/96, complete genometype IV prepilin9e-59228
NC_008463:5246954:5286291528629152876191329Pseudomonas aeruginosa UCBPP-PA14, complete genomeType IV B pilus protein2e-49196
NC_015224:3587500:3601516360151636028321317Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Large exoprotein involved in heme utilization or adhesion3e-49196
NC_018080:5091772:5131282513128251326611380Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilus protein PilV2e-47190
NC_009656:4527457:4611877461187746132561380Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilus protein PilV1e-46187
NC_004129:5373886:5408742540874254099531212Pseudomonas fluorescens Pf-5, complete genometype IV prepilin PilV, putative2e-44179
NC_012751:1296877:1310861131086113122251365Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein6e-37155
NC_012751:942315:9483479483479496151269Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein1e-36154
NC_005773:866157:889863889863890840978Pseudomonas syringae pv. phaseolicola 1448A, complete genometype IV pilus protein PilV2, putative, truncated6e-31135
NC_004547:611178:6140716140716154651395Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus prepilin protein4e-24112
NC_007507:11000:2002320023215101488Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilV-like type IV prepilin2e-20100
NC_010682:1624985:1632361163236116336591299Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein4e-1376.3
NC_007950:185500:1938351938351953581524Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein2e-0860.5
NC_016832:948029:9668079668079682281422Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Prepilin-type N-cleavage/methylation domain protein2e-0757.4
NC_011149:1987291:2001320200132020027561437Salmonella enterica subsp. enterica serovar Agona str. SL483,prepilin-type N- cleavage/methylation domain protein2e-0653.9
NC_011601:2139188:2163561216356121650241464Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-0653.1
NC_008253:1938975:1950936195093619523991464Escherichia coli 536, complete genomePilV-like protein4e-0652.8
NC_004431:2185750:2197781219778121992441464Escherichia coli CFT073, complete genomePilV-like protein4e-0652.8