Pre_GI: BLASTP Hits

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Query: NC_009708:2788855:2815051 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2815051, End: 2816652, Length: 1602

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:2820500:2845578284557828471791602Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family0930
NC_009381:1682000:1682016168201616836171602Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0926
NC_017060:125480:1543521543521559561605Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion-associated protein0639
NC_012962:4427000:4435406443540644370071602Photorhabdus asymbiotica, complete genomehypothetical protein3e-157555
NC_016612:28451:5557555575571491575Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-152537
NC_008563:3119284:3139452313945231410891638Escherichia coli APEC O1, complete genomehypothetical protein1e-151536
NC_014121:1822895:1838342183834218399401599Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasJ1e-148526
NC_013956:4579759:4578161457816145797621602Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-148526
NC_009648:1487692:1508599150859915101971599Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-145514
NC_012731:2302974:2321926232192623235241599Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-145514
NC_010501:3575726:3578580357858035801661587Pseudomonas putida W619, complete genometype VI secretion-associated protein, VC_A0119 family1e-140500
NC_014837:3766426:3790283379028337918601578Pantoea sp. At-9b chromosome, complete genometype VI secretion-associated protein1e-132473
NC_012721:1395417:1397244139724413988301587Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-91337
NC_014118:1171411:1171411117141111729971587Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion-associated protein, VC_A0119 family2e-91337
NC_007348:2011957:2029244202924420308181575Ralstonia eutropha JMP134 chromosome 2, complete sequenceImpA, N-terminal3e-91336
NC_010552:592154:6109656109656125481584Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion-associated protein, VC_A0119 family3e-87323
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein1e-68261
NC_016612:5600177:560294756029475603309363Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-28127
NC_016612:5600177:560276356027635602957195Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1688.6
NC_009648:3476000:349049334904933490885393Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-0860.8
NC_007517:306508:3065083065083088802373Geobacter metallireducens GS-15, complete genomeImpA-like4e-0860.1
NC_009656:3733913:3744965374496537465211557Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-0756.2