Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2542522 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2542522, End: 2543136, Length: 615

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013890:1142500:116123511612351161966732Dehalococcoides sp. GT chromosome, complete genomeputative DNA modification protein9e-1167
NC_020387:1257163:128288712828871283618732Dehalococcoides mccartyi BTF08, complete genomehypothetical protein8e-1063.5
NC_013890:1142500:114714111471411147833693Dehalococcoides sp. GT chromosome, complete genomehypothetical protein3e-0962
NC_013552:1187299:119289611928961193588693Dehalococcoides sp. VS, complete genomeDNA modification protein3e-0962
NC_020387:1257163:126224812622481262787540Dehalococcoides mccartyi BTF08, complete genomehypothetical protein1e-0756.2