Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2541239 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2541239, End: 2542255, Length: 1017

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:2565605:256828025682802569269990Enterobacteriaceae bacterium strain FGI 57, complete genomephage terminase, small subunit5e-37155
NC_009648:1541699:1569749156974915707531005Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-37154
NC_015663:4522109:452482045248204525812993Enterobacter aerogenes KCTC 2190 chromosome, complete genometerminase small subunit3e-36152
NC_013850:2182337:2214492221449222154961005Klebsiella variicola At-22 chromosome, complete genomeTerminase small subunit2e-35149
NC_016902:2580774:2582092258209225831831092Escherichia coli KO11FL chromosome, complete genometerminase small subunit4e-35149
CP002516:2580774:2582092258209225831831092Escherichia coli KO11, complete genometerminase small subunit4e-35149
NC_016514:2476359:249393624939362494934999Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein8e-34144
NC_008563:1475500:148934714893471490105759Escherichia coli APEC O1, complete genomehypothetical protein3e-30132
NC_015563:4583906:459287845928784593654777Delftia sp. Cs1-4 chromosome, complete genomeTerminase small subunit3e-1582.8
NC_012563:2680246:268024626802462680815570Clostridium botulinum A2 str. Kyoto, complete genomeputative phage terminase, small subunit1e-1481.3
NC_011001:2085986:210344221034422104215774Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phage terminase small subunit2e-1377
NC_015520:595532:601437601437601949513Mahella australiensis 50-1 BON chromosome, complete genomeTerminase small subunit2e-0860.1
NC_012660:3116500:313637931363793136978600Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage-like protein1e-0757.8
NC_016935:6464201:647577064757706476294525Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0756.6
NC_016845:1285435:130773213077321308109378Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-0755.1
NC_013850:1887556:191236319123631912965603Klebsiella variicola At-22 chromosome, complete genomehypothetical protein8e-0651.6
NC_003198:1908238:191107319110731911822750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage protein8e-0651.6