Pre_GI: BLASTP Hits

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Query: NC_009708:1497898:1509856 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1509856, End: 1510269, Length: 414

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3237990:324489632448963245309414Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-74276
NC_010634:3155741:316264731626473163060414Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-74275
NC_008800:1300500:132331813233181323731414Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-64244
NC_012214:1:212922129221690399Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein4e-29126
NC_012559:2353236:237050423705042370899396Laribacter hongkongensis HLHK9, complete genomePossible exported protein3e-21100
NC_016845:2781438:280429328042932804751459Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-1166.6
NC_012731:2739964:276387327638732764277405Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-1166.6
NC_009483:4015777:402353540235354023939405Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-1166.6
NC_010498:1615980:161838816183881618780393Escherichia coli SMS-3-5, complete genomehypothetical protein2e-0961.2
NC_009800:1632585:164717216471721647564393Escherichia coli HS, complete genomeconserved hypothetical protein TIGR001564e-0960.1
NC_012947:2189533:220859022085902208982393Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-0960.1
CP002516:2361628:236242223624222362814393Escherichia coli KO11, complete genomeprotein of unknown function DUF388, OB-fold protein6e-0959.7
CP002185:1727493:174304117430411743433393Escherichia coli W, complete genomeconserved protein6e-0959.7
CU928160:1625535:164108316410831641475393Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein6e-0959.7
NC_011741:1625535:164108316410831641475393Escherichia coli IAI1 chromosome, complete genomehypothetical protein6e-0959.7
NC_016902:2361628:236242223624222362814393Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-0959.7
NC_011415:1715644:173119217311921731584393Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-0959.3
NC_010067:1414000:141408614140861414478393Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0959.3
NC_013716:1618249:163006816300681630403336Citrobacter rodentium ICC168, complete genomehypothetical protein4e-0753.5
NC_016945:666000:678225678225678623399Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-0753.1