Pre_GI: BLASTP Hits

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Query: NC_009708:1497898:1500599 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1500599, End: 1501057, Length: 459

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3237990:325410332541033254561459Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein8e-85311
NC_010634:3155741:317189531718953172353459Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein8e-85311
NC_008800:1300500:130669413066941307152459Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-81300
NC_012880:3748665:376356637635663764015450Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF1881e-67254
NC_004337:309833:334887334887335465579Shigella flexneri 2a str. 301, complete genomehypothetical protein8e-61232
NC_004741:310382:334021334021334599579Shigella flexneri 2a str. 2457T, complete genomehypothetical protein8e-61232
NC_014310:1750817:176460217646021765084483Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein1e-42171
NC_016026:1969766:199715919971591997611453Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein5e-41166
NC_002939:173833:187341187341187796456Geobacter sulfurreducens PCA, complete genomeYaiI/YqxD family protein8e-38155
NC_015580:1745918:176138517613851761837453Novosphingobium sp. PP1Y, complete genomehypothetical protein2e-2097.8
NC_004193:375416:480995480995481435441Oceanobacillus iheyensis HTE831, complete genomehypothetical protein8e-1889.4
NC_015391:2059191:206538620653862065829444Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein2e-1477.8
NC_006322:2592176:261048026104802610971492Bacillus licheniformis ATCC 14580, complete genomeYqxD2e-1168.2
NC_006270:2591317:260962126096212610112492Bacillus licheniformis ATCC 14580, complete genomeconserved protein YqxD2e-1168.2
NC_016048:2907702:292456329245632925030468Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-0962.4