Pre_GI: BLASTP Hits

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Query: NC_009705:78000:83794 Yersinia pseudotuberculosis IP 31758 plasmid_153kb, complete

Start: 83794, End: 84912, Length: 1119

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:4557037:4563222456322245643671146Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-66253
NC_013421:701005:740782740782741777996Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1997.1
NC_016816:4129299:413177041317704132759990Pantoea ananatis LMG 5342, complete genomeputative type IV pilus protein, TraE1e-1894.7
NC_010102:4557037:4575596457559645766121017Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1892.8
NC_004547:611178:618090618090618890801Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid transfer protein6e-1478.6
NC_014121:489500:520505520505521494990Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1377.8
NC_011745:3443371:344557434455743446395822Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1066.6
NC_012880:3529017:355367935536793554011333Dickeya dadantii Ech703, complete genomehypothetical protein1e-0758.2