Pre_GI: BLASTP Hits

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Query: NC_009664:570768:578237 Kineococcus radiotolerans SRS30216, complete genome

Start: 578237, End: 579808, Length: 1572

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014562:1844268:1844268184426818456891422Pantoea vagans C9-1 chromosome, complete genomeFlagellar hook-associated protein 24e-1583.2
NC_013093:2599591:2608022260802226093141293Actinosynnema mirum DSM 43827, complete genomeflagellar hook-associated 2 domain protein2e-1480.9
NC_006177:3192500:3198980319898032004101431Symbiobacterium thermophilum IAM 14863, complete genomeflagellar hook-associated protein4e-1170.1
NC_019978:2260395:2270160227016022719111752Halobacteroides halobius DSM 5150, complete genomeflagellar capping protein4e-0860.1
NC_014837:2586870:2592215259221525936511437Pantoea sp. At-9b chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-0758.9
NC_018870:2232857:225232522523252253029705Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflagellar hook protein 2 FliD2e-0758.2
NC_015589:1240197:1259615125961512621192505Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein2e-0757.8
NC_015563:606783:6230516230516244421392Delftia sp. Cs1-4 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein6e-0756.2
NC_016514:2950860:2971563297156329729811419Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar hook-associated protein 21e-0655.1
NC_016641:945284:9490099490099504811473Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar capping protein2e-0654.3