Pre_GI: BLASTP Hits

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Query: NC_009664:533021:545381 Kineococcus radiotolerans SRS30216, complete genome

Start: 545381, End: 545908, Length: 528

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:1075592:108001510800151080806792Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook capping protein8e-0960.1
NC_010673:291679:297500297500297934435Borrelia hermsii DAH, complete genomebasal-body rod modification protein FlgD9e-0959.7
NC_008710:277207:296791296791297225435Borrelia turicatae 91E135, complete genomebasal-body rod modification protein FlgD3e-0858.2
NC_009012:574145:587106587106588077972Clostridium thermocellum ATCC 27405, complete genomeflagellar hook capping protein6e-0857
NC_007645:4195500:422568142256814226091411Hahella chejuensis KCTC 2396, complete genomeFlagellar hook capping protein1e-0755.8
NC_017238:272980:293892293892294335444Borrelia afzelii PKo chromosome, complete genomeflagellar hook assembly scaffolding protein1e-0755.8
NC_011728:269853:294153294153294596444Borrelia burgdorferi ZS7, complete genomeflagellar basal body rod modification protein3e-0754.7
NC_009253:2615777:262294326229432623500558Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar hook capping protein3e-0754.7
NC_006156:271410:293552293552293995444Borrelia garinii PBi chromosome linear, complete sequenceflagellar hook assembly protein6e-0753.5
NC_016584:4363382:438370943837094384500792Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook capping protein7e-0753.5
NC_014652:628435:643647643647644141495Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar hook capping protein9e-0753.1
NC_021508:775264:794888794888795349462Treponema pallidum subsp. pallidum SS14, complete genomeflagellar basal body rod modification protein FlgD3e-0651.6
NC_017268:775000:794658794658795119462Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar hook capping protein3e-0651.6
NC_016848:775822:795446795446795907462Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeflagellar basal body rod modification protein FlgD3e-0651.6
NC_016844:775334:795346795346795807462Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar basal body rod modification protein FlgD3e-0651.6
NC_016843:775371:795179795179795640462Treponema pallidum subsp. pertenue str. Gauthier chromosome,flagellar basal body rod modification protein FlgD3e-0651.6
NC_000919:773784:793408793408793869462Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar hook assembly protein3e-0651.6
NC_014377:1060000:108066710806671081056390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar hook capping protein3e-0651.6
NC_015714:768500:788290788290788751462Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar basal body rod modification protein FlgD3e-0651.2
NC_012880:1765920:180939918093991810076678Dickeya dadantii Ech703, complete genomeflagellar hook capping protein5e-0650.4