Pre_GI: BLASTP Hits

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Query: NC_009664:533021:543397 Kineococcus radiotolerans SRS30216, complete genome

Start: 543397, End: 543714, Length: 318

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:1663324:167519616751961675396201Clostridium acidurici 9a chromosome, complete genomeflagellar FlbD family protein3e-1063.9
NC_014652:628435:646213646213646440228Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar flbd family protein1e-0962
NC_016751:1979201:198973619897361989939204Marinitoga piezophila KA3 chromosome, complete genomemotility protein1e-0961.6
NC_009633:2725128:272931327293132729510198Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar FlbD family protein4e-0960.1
NC_011728:269853:292573292573292797225Borrelia burgdorferi ZS7, complete genomehypothetical protein5e-0959.7
NC_001318:270488:293205293205293429225Borrelia burgdorferi B31, complete genomeflagellar protein (flbD)5e-0959.7
NC_015921:272517:291754291754291978225Borrelia bissettii DN127 chromosome, complete genomeflagellar family protein6e-0959.3
NC_017238:272980:292314292314292538225Borrelia afzelii PKo chromosome, complete genomeflagellar family protein2e-0858.2
NC_008277:272741:292075292075292299225Borrelia afzelii PKo, complete genomeflagellar protein2e-0858.2
NC_006156:271410:291973291973292197225Borrelia garinii PBi chromosome linear, complete sequenceflagellar protein6e-0856.2
NC_015391:2059191:208063320806332080836204Carnobacterium sp. 17-4 chromosome, complete genomeputative flagellar protein9e-0855.8
NC_019978:625476:640889640889641080192Halobacteroides halobius DSM 5150, complete genomeuncharacterized protein, possibly involved in motility2e-0754.3
NC_014330:841841:849505849505849729225Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative flagellar family protein6e-0752.8
NC_018604:2303239:230883923088392309063225Brachyspira pilosicoli WesB complete genomeputative flagellar family protein6e-0752.8
NC_009698:2649453:265489926548992655108210Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FlbD1e-0652
NC_009697:2714668:271797227179722718181210Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FlbD1e-0652
NC_021182:2883716:290062629006262900820195Clostridium pasteurianum BC1, complete genomeuncharacterized protein, possibly involved in motility1e-0652
NC_018607:2184832:219043221904322190656225Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar family protein1e-0652
NC_020291:4903981:492857949285794928770192Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar protein FlbD8e-0649.3