Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4633438 Kineococcus radiotolerans SRS30216, complete genome

Start: 4633438, End: 4634718, Length: 1281

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:2241647:2244553224455322458151263Streptomyces fulvissimus DSM 40593, complete genomeMajor facilitator superfamily MFS_16e-1892.4
NC_010617:92000:1124411124411137211281Kocuria rhizophila DC2201, complete genomeputative MFS transporter4e-1583.2
NC_009921:5681677:5699321569932157006521332Frankia sp. EAN1pec, complete genomemajor facilitator superfamily MFS_11e-1481.3
NC_010545:1729161:1731853173185317331871335Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-1067.4
NC_007908:1010162:1021985102198510232111227Rhodoferax ferrireducens T118, complete genomemajor facilitator superfamily MFS_12e-0860.5
NC_012483:3529895:3546790354679035481091320Acidobacterium capsulatum ATCC 51196, complete genometransporter, major facilitator family8e-0858.9
NC_013524:392089:3945533945533958481296Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_003296:1461538:1482844148284414841181275Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN2e-0757.4
NC_009439:4734237:4754199475419947554431245Pseudomonas mendocina ymp, complete genomemajor facilitator transporter2e-0757.4
NC_013592:1056500:1073143107314310743631221Dickeya dadantii Ech586, complete genomemajor facilitator superfamily MFS_15e-0756.2
NC_012880:3421500:3426826342682634280941269Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_16e-0755.8
NC_017025:283182:2875292875292887851257Flavobacterium indicum GPTSA100-9, complete genomeMajor facilitator superfamily (MFS) permease2e-0653.9
NC_012880:1765920:1777813177781317791111299Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_14e-0653.1