Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4480667 Kineococcus radiotolerans SRS30216, complete genome

Start: 4480667, End: 4482022, Length: 1356

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010407:1775227:1796470179647017978101341Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative integral membrane transport protein1e-116420
NC_009664:4423829:4468182446818244695221341Kineococcus radiotolerans SRS30216, complete genomemajor facilitator superfamily MFS_13e-82305
NC_015514:3877810:3881343388134338826681326Cellulomonas fimi ATCC 484 chromosome, complete genomemajor facilitator superfamily protein3e-36153
NC_013757:2046000:2061774206177420630511278Geodermatophilus obscurus DSM 43160, complete genomemajor facilitator superfamily MFS_15e-36152
NC_013235:464049:4640494640494653291281Nakamurella multipartita DSM 44233, complete genomemajor facilitator superfamily MFS_15e-36152
NC_015588:1847500:1847557184755718488521296Isoptericola variabilis 225 chromosome, complete genomemajor facilitator superfamily MFS_12e-35150
NC_015389:1858732:1880626188062618819211296Coriobacterium glomerans PW2 chromosome, complete genomemajor facilitator superfamily MFS_13e-1790.5
NC_015389:1858732:1875644187564418769391296Coriobacterium glomerans PW2 chromosome, complete genomemajor facilitator superfamily MFS_16e-1789
NC_007576:1747662:1769205176920517704881284Lactobacillus sakei subsp. sakei 23K, complete genomePutative melibiose:Na(+) transport protein5e-1375.9
NC_013929:2583849:2590242259024225915671326Streptomyces scabiei 87.22 chromosome, complete genomemajor facilitator transporter1e-1275.1
NC_008618:1487000:1501307150130715025631257Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical membrane protein with possible transport function6e-1169.3
NC_008618:1487000:1505475150547515068001326Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical membrane protein with possible transport function6e-1169.3
NC_010545:11950:1195011950133081359Corynebacterium urealyticum DSM 7109, complete genomeputative permease of the major facilitator superfamily5e-0962.8
NC_014246:1730000:1735957173595717372941338Mobiluncus curtisii ATCC 43063 chromosome, complete genomemajor facilitator transporter2e-0654.3