Pre_GI: BLASTP Hits

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Query: NC_009664:4377777:4386963 Kineococcus radiotolerans SRS30216, complete genome

Start: 4386963, End: 4387562, Length: 600

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016025:596670:5966705966705977251056Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein5e-42170
NC_017271:1289278:1297992129799212990471056Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein3e-37154
NC_009523:341347:3462563462563472991044Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein8e-36150
NC_008786:1936626:1949520194952019505841065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10168e-36149
NC_012416:753500:7771587771587782161059Wolbachia sp. wRi, complete genomephage uncharacterized protein1e-35149
NC_008713:259791:282357282357283154798Arthrobacter aurescens TC1 plasmid TC2, complete sequenceProtein of unknown function (DUF1016)1e-34145
NC_014550:3316115:3339816333981633408591044Arthrobacter arilaitensis Re117, complete genomehypothetical protein7e-34143
NC_010981:1371265:1383152138315213841831032Wolbachia pipientis, complete genomephage uncharacterized protein7e-34143
NC_004578:1190000:1194524119452411955761053Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-32137
NC_013235:1218378:1226710122671012278161107Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF10164e-30130
NC_009930:152500:1701311701311711771047Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein6e-30130
NC_008713:259791:2775932775932786421050Arthrobacter aurescens TC1 plasmid TC2, complete sequenceProtein of unknown function (DUF1016)3e-28125
NC_014393:4612301:4635899463589946369121014Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein6e-28124
NC_010170:4196197:4212350421235042134741125Bordetella petrii, complete genomehypothetical protein1e-22106
NC_009664:4423829:4435284443528444364651182Kineococcus radiotolerans SRS30216, complete genomeprotein of unknown function DUF10162e-21102
NC_012416:205925:2074192074192084421024Wolbachia sp. wRi, complete genome6e-21100
NC_005126:1223042:1250272125027212513421071Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-2097.4
NC_014228:2270000:2297557229755722986241068Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-1995.9
NC_016629:3789554:3805354380535438063881035Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein3e-1995.1
NC_015577:786155:8014268014268024601035Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-1892
NC_014973:3452100:3486721348672134877641044Geobacter sp. M18 chromosome, complete genomehypothetical protein4e-1891.3
NC_011886:1176238:120540012054001205936537Arthrobacter chlorophenolicus A6, complete genomeprotein of unknown function DUF10166e-1684
NC_005773:694990:7131137131137141291017Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-1477
NC_013410:1651000:1656440165644016575131074Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-1375.9
NC_008786:1298817:1312871131287113139351065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10162e-1375.9
NC_015977:2874000:2885157288515728862151059Roseburia hominis A2-183 chromosome, complete genomehypothetical protein5e-1374.3
NC_008752:725189:7320527320527330771026Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF10162e-0858.9
NC_013235:3129384:313171631317163131997282Nakamurella multipartita DSM 44233, complete genome4e-0858.2
NC_006087:2292791:230723323072332308111879Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein6e-0857.4
NC_010002:3002354:3014164301416430153001137Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF10166e-0857.4
NC_009052:4335754:4347122434712243482041083Shewanella baltica OS155, complete genomeprotein of unknown function DUF10168e-0857
NC_019968:1304450:1325487132548713267701284Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein2e-0755.8
NC_003295:2787371:2823536282353628246031068Ralstonia solanacearum GMI1000, complete genomehypothetical protein6e-0753.9