Pre_GI: BLASTP Hits

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Query: NC_009664:4377777:4386533 Kineococcus radiotolerans SRS30216, complete genome

Start: 4386533, End: 4386895, Length: 363

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:4435284443528444364651182Kineococcus radiotolerans SRS30216, complete genomeprotein of unknown function DUF10162e-1787.8
NC_006087:2292791:230723323072332308111879Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein6e-1372.8
NC_008713:259791:2775932775932786421050Arthrobacter aurescens TC1 plasmid TC2, complete sequenceProtein of unknown function (DUF1016)4e-1166.6
NC_013235:1218378:1226710122671012278161107Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF10166e-1166.2
NC_008786:1298817:1312871131287113139351065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10163e-1063.5
NC_016025:596670:5966705966705977251056Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein2e-0961.6
NC_014973:3452100:3486721348672134877641044Geobacter sp. M18 chromosome, complete genomehypothetical protein4e-0960.1
NC_017271:1289278:1297992129799212990471056Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein9e-0958.9
NC_015571:2002489:2027231202723120284991269Porphyromonas gingivalis TDC60, complete genomehypothetical protein8e-0958.9
NC_014550:3316115:3339816333981633408591044Arthrobacter arilaitensis Re117, complete genomehypothetical protein8e-0958.9
NC_015311:813989:8206338206338219101278Prevotella denticola F0289 chromosome, complete genomehypothetical protein1e-0858.5
NC_019968:1304450:1325487132548713267701284Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein1e-0858.2
NC_008786:1936626:1949520194952019505841065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10162e-0858.2
NC_016629:3789554:3805354380535438063881035Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein4e-0857
NC_004578:1190000:1194524119452411955761053Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0857
NC_013730:4118355:4130993413099341320781086Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF10164e-0856.6
NC_005773:694990:7131137131137141291017Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-0855.8
NC_015578:1038588:104684410468441047842999Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-0754.7
NC_009930:152500:1701311701311711771047Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein2e-0754.7
NC_009523:341347:3462563462563472991044Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein2e-0754.7
NC_015977:2874000:2885157288515728862151059Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-0753.5
NC_009052:4335754:4347122434712243482041083Shewanella baltica OS155, complete genomeprotein of unknown function DUF10164e-0753.5
NC_015731:1:1018210182112371056Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein4e-0753.5
NC_015510:2907815:2913133291313329142421110Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein9e-0752.4
NC_015222:3137167:314349831434983144493996Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein1e-0652
NC_014228:2270000:2297557229755722986241068Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0652
NC_011832:1535740:154519415451941545784591Candidatus Methanosphaerula palustris E1-9c, complete genome3e-0650.4