Pre_GI: BLASTP Hits

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Query: NC_009664:4347718:4356776 Kineococcus radiotolerans SRS30216, complete genome

Start: 4356776, End: 4357258, Length: 483

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014318:1537732:155369915536991554235537Amycolatopsis mediterranei U32 chromosome, complete genomeMarR family transcriptional regulator1e-39162
NC_019673:3041936:305489630548963055402507Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MarR family4e-29127
NC_014210:5309121:531076553107655311274510Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MarR family2e-27121
NC_013093:2633000:263727426372742637786513Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, MarR family5e-26116
NC_013510:747042:767934767934768416483Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, MarR family3e-24110
NC_014329:844622:873909873909874385477Corynebacterium pseudotuberculosis FRC41 chromosome, completeMarR family transcriptional regulator2e-21101
NC_016932:832748:862024862024862500477Corynebacterium pseudotuberculosis 316 chromosome, complete genomeMultiple antibiotic resistance protein marR2e-21101
NC_017031:863093:873752873752874228477Corynebacterium pseudotuberculosis P54B96 chromosome, completeMultiple antibiotic resistance protein marR2e-21101
NC_017300:863898:873805873805874281477Corynebacterium pseudotuberculosis 1002 chromosome, completeMultiple antibiotic resistance protein marR2e-21101
NC_017301:863500:873527873527874003477Corynebacterium pseudotuberculosis C231 chromosome, completeMultiple antibiotic resistance protein marR2e-21101
NC_017303:863060:873720873720874196477Corynebacterium pseudotuberculosis I19 chromosome, complete genomeMultiple antibiotic resistance protein marR2e-21101
NC_017305:863072:873732873732874208477Corynebacterium pseudotuberculosis PAT10 chromosome, completeMultiple antibiotic resistance protein marR2e-21101
NC_018524:2423016:243136224313622431868507Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemarR family protein5e-2097.1
NC_015683:947048:955432955432955929498Corynebacterium ulcerans BR-AD22 chromosome, complete genomeMarR family transcription regulator3e-1994.4
NC_017317:944218:952602952602953099498Corynebacterium ulcerans 809 chromosome, complete genomeMarR-family transcription regulator3e-1994.4
NC_012522:4299287:430427643042764304758483Rhodococcus opacus B4, complete genomeputative MarR family transcriptional regulator8e-1786.3
NC_013595:1851226:185699518569951857471477Streptosporangium roseum DSM 43021, complete genomeputative MarR-family regulatory protein4e-1477
NC_018524:4656786:466044846604484660948501Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemarR family protein5e-1270.1
NC_013174:562856:564006564006564491486Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, MarR family2e-1064.7
NC_003888:8569962:857740385774038577879477Streptomyces coelicolor A3(2), complete genomeMarR-family transcriptional regulator3e-0960.8
NC_016781:844613:874140874140874376237Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeMultiple antibiotic resistance protein marR1e-0859.3
NC_017186:7333732:735351773535177354026510Amycolatopsis mediterranei S699 chromosome, complete genomeMarR family transcriptional regulator6e-0856.6
NC_014318:7333688:735347373534737353982510Amycolatopsis mediterranei U32 chromosome, complete genomeMarR family transcriptional regulator6e-0856.6