Pre_GI: BLASTP Hits

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Query: NC_009664:4225325:4240433 Kineococcus radiotolerans SRS30216, complete genome

Start: 4240433, End: 4240657, Length: 225

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:4491413:449418244941824494526345Micromonospora sp. L5 chromosome, complete genomeglutaredoxin2e-24111
NC_010175:2488000:250570525057052505956252Chloroflexus aurantiacus J-10-fl, complete genomeglutaredoxin-like protein6e-1889.4
NC_014210:3170537:317458531745853174839255Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,glutaredoxin1e-1271.6
NC_015125:1136734:115959811595981159855258Microbacterium testaceum StLB037, complete genomeglutaredoxin8e-0958.9
NC_014616:213118:220089220089220337249Bifidobacterium bifidum S17 chromosome, complete genomeglutaredoxin-like protein4e-0857
NC_014638:183115:190085190085190333249Bifidobacterium bifidum PRL2010 chromosome, complete genomeglutaredoxin6e-0856.2
NC_011026:2269986:227719222771922277443252Chloroherpeton thalassium ATCC 35110, complete genomeglutaredoxin1e-0755.1
NC_015683:732668:743648743648743899252Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-0755.1
NC_002935:781172:796859796859797116258Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-0754.7
NC_013929:9450747:9454147945414794558921746Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin reductase4e-0650.4