Pre_GI: BLASTP Hits

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Query: NC_009664:3969609:3988523 Kineococcus radiotolerans SRS30216, complete genome

Start: 3988523, End: 3989950, Length: 1428

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014830:335380:3522053522053539561752Intrasporangium calvum DSM 43043 chromosome, complete genomeDomain of unknown function DUF19941e-1378.6
NC_014328:2426921:2436213243621324391222910Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein6e-1272.4
NC_015520:2567329:2581460258146025833461887Mahella australiensis 50-1 BON chromosome, complete genometransglutaminase domain-containing protein2e-1171.2
NC_011830:3528665:3530497353049735326172121Desulfitobacterium hafniense DCB-2, complete genomeputative cell wall binding repeat 2-containing protein2e-1067.4
NC_010376:28812:3724337243419074665Finegoldia magna ATCC 29328, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1067.4
NC_015172:1075592:1095774109577411005974824Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecell wall binding repeat 2-containing protein7e-1065.9
NC_016584:3847663:3863026386302638676574632Desulfosporosinus orientis DSM 765 chromosome, complete genomecell wall-binding protein1e-0965.1
NC_014328:2426921:2442291244229124442551965Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-0963.9
NC_010376:28812:3102331023369055883Finegoldia magna ATCC 29328, complete genomecell wall-associated serine proteinase precursor3e-0963.5
NC_009664:452195:4521954521954539971803Kineococcus radiotolerans SRS30216, complete genomeputative cell wall binding repeat 2-containing protein5e-0962.8
NC_014328:3336000:3349827334982733513021476Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein7e-0962.4
NC_011830:4399642:440620144062014407181981Desulfitobacterium hafniense DCB-2, complete genomeputative cell wall binding repeat 2-containing protein7e-0962.4
NC_007907:2249607:2251795225179522543742580Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0861.2
NC_007907:3722500:3752354375235437540301677Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0860.8
NC_018515:1406816:1414764141476414208416078Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein3e-0860.1
NC_018515:1406816:1421052142105214269855934Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein5e-0859.7
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)6e-0859.3
NC_014328:2426921:2430181243018124320701890Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein7e-0858.9
NC_010376:186510:1934951934951954681974Finegoldia magna ATCC 29328, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-0758.5
NC_007907:2249607:2257635225763522635325898Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0758.5
NC_011830:4722607:4749674474967447513861713Desulfitobacterium hafniense DCB-2, complete genomeIg domain protein group 2 domain protein1e-0758.2
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0757.8
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0757.8
NC_014328:3823902:3831411383141138378246414Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-0757.8
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0757.8
NC_014328:522045:5416295416295431881560Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein3e-0757
NC_014666:4419693:4430873443087344326871815Frankia sp. EuI1c chromosome, complete genomeserine/threonine protein kinase5e-0756.2
NC_016584:1436710:1446961144696114515414581Desulfosporosinus orientis DSM 765 chromosome, complete genomegluconolactonase5e-0756.2
NC_010376:49185:6033260332680177686Finegoldia magna ATCC 29328, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0654.7
NC_009089:3241918:3241918324191832443292412Clostridium difficile 630, complete genomecell surface protein (putative cell surface-associated cysteine protease)2e-0654.7
NC_010376:1711182:1722867172286717242971431Finegoldia magna ATCC 29328, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0654.3
NC_014328:938393:9539089539089561212214Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-0654.3
NC_007907:3722500:3759012375901237609401929Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0653.5
NC_015520:224136:2513782513782550163639Mahella australiensis 50-1 BON chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin6e-0652.8