Pre_GI: BLASTP Hits

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Query: NC_009664:1569335:1614229 Kineococcus radiotolerans SRS30216, complete genome

Start: 1614229, End: 1614690, Length: 462

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013174:601434:610171610171610653483Jonesia denitrificans DSM 20603, complete genomehypothetical protein2e-2097.8
NC_016109:3591401:361608936160893616547459Kitasatospora setae KM-6054, complete genomeputative fatty acid synthase4e-1993.6
NC_015957:639774:659685659685660155471Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein1e-1892
NC_003888:5042283:506185950618595062311453Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-1788.6
NC_016114:3008500:300902330090233009475453Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacyl dehydratase MaoC2e-1787.8
NC_013929:4186840:420456442045644205016453Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1787
NC_010572:3363830:338583933858393386291453Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-1685.5
NC_002944:4446083:445354144535414454065525Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-1168.2
NC_008268:3162824:317784131778413178296456Rhodococcus sp. RHA1, complete genomehypothetical protein3e-1064.3
NC_008146:1016446:101689210168921017401510Mycobacterium sp. MCS, complete genomehypothetical protein2e-0961.2
NC_008705:1022252:102269810226981023207510Mycobacterium sp. KMS, complete genomeconserved hypothetical protein2e-0961.2
NC_009077:1027357:103131210313121031821510Mycobacterium sp. JLS, complete genomehypothetical protein6e-0959.7
NC_008268:7485710:750796975079697508517549Rhodococcus sp. RHA1, complete genomehypothetical protein3e-0857.4
NC_009511:1781914:179017017901701790616447Sphingomonas wittichii RW1 chromosome, complete genomehypothetical protein6e-0856.6
NC_008705:1022252:102178610217861022265480Mycobacterium sp. KMS, complete genomeconserved hypothetical protein8e-0856.2
NC_008146:1016446:101598010159801016459480Mycobacterium sp. MCS, complete genomehypothetical protein8e-0856.2
NC_009077:1027357:103040210304021030881480Mycobacterium sp. JLS, complete genomehypothetical protein7e-0752.8
NC_010612:103081:1326041326041336351032Mycobacterium marinum M, complete genomehypothetical protein1e-0549.3
NC_020133:77341:9364493644946481005Mycobacterium liflandii 128FXT, complete genomeMaoC-like dehydratase1e-0549.3